Gene OSTLU_88830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88830 
Symbol 
ID5004885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp417806 
End bp419242 
Gene Length1437 bp 
Protein Length478 aa 
Translation table 
GC content68% 
IMG OID640420306 
Productpredicted protein 
Protein accessionXP_001420684 
Protein GI145352717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.510885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0405652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGC GCGCGCCGGC GTACGAACAC GCGGGCGCGC GCGAGGGACG CGCGATCGAC 
GACGGAGACG ACGGTGACGA CGCGCGCGCG ACGCGCGGCG CGCGAGCGAG CGGCGCGGAC
GCGGACGCGG ACGCGGGACG GAACGACGAC GACGACGCGC GGCGACGACG CGAACGCGAG
ACGACGAGCG GCGAGCTGAC GCTGCCGCAA TCGTTCGGCG CCGTCGCGCT GGGCGAACGG
TTTAGCTCGT TCGTGACGTT TGGGAATTTT TCAGAGCCGA CGAGCGGGGC GAGCGGGACG
GCGCGGGAGA TCGGGATCAA GGTGGAGCTG CAGACGGAGA CGCGGCGAAC GACGCTGCGA
GACGGGACGA AGACGCCGAT TGAGACGCTG CGACCGGGGG AGAAGGTGGA TTTGATCGTC
ACGAAGGATT TGAAAGAGCT CGGCGCGCAC ACGCTGGTGT GCTCGGCGAC GTATTACGAC
GCCGCGGGGG AGCGGAAGTA TTCGCCGCAG TATTTCAAGT TCAACGTGGC GAATCCGCTG
AGCGTGCGAA CGAAGGTTCG CGCGGCGCCG CGCGGGCGCG CGTTTCTCGA GGTGTGCATC
GAAAATACGA CGAGGTATGC GTTGTTGCTC GATAGCGCGC GCTTCGATAC GGTGGATGGG
ATCTTGGCGA AGGACATGAC GCCAGAATTC GGCGGCGCCG CGGCGACGCT CCACGGCGTC
GACGACTCCC CGGACGCCGG TTTACCTTCG CTCGGTAAGC GCGCGGTGTA TCGCCTCGAT
CCATCGACCG GGGCTGCGCA CTATCTTTTC GAAATCACGC GCGCGAACGC GAGCGAGGAA
CCGCTGACGC CGCAGACACA GCTCGGAAAA CTCGAGCTCC GCTGGCGCGG CGCCATGGGC
GATCCCGGCC GGTTGCAGAC GCAAGTCATC ACCGCCGGCA GCGCGGGATC GACCGCTCCC
TCCCCGGTCG CGGCGAAGAT GCGTCAGTCG ATCATCGTCC ACCCACGACC GCCCGACGCC
GAGGACGTGA GCACGGTGTA CGCGGAAACG CCGTTCATCC TGCGCGCCGC CGTCGAGGCC
CTCGCGCCCA TCAAAGCCGA CGCCTGCGTC GTCCGCGTCA AAGATGTCGT CTCCGGCGTC
TACATCGACG GTCCGCGCGC GGTGCGCGTC GGCGCTTTAT CCCCTGGACA AACCGTCAAC
GTCGACATTC CGTGCGTCGC GCTCGGCTTG GGCGTCCAAA CGTGCCCGTC CCTCGTCCTC
TGCGACGCCG TCGACGACGC CGCGCGCGCG GCGCCCGCGC CGTTGGAAGT CTTCTCCGTC
ATCCCGCCCC CGTCCGTCGT CCTCGACGCG CTCAAACGCG TCGAAACCAT CGACGTCGCG
TCGCCGCCCG TCGACGTCGC GCCGTCGCTC GACGCACCGA TCGACTCGCT TTTGTAA
 
Protein sequence
MRLRAPAYEH AGAREGRAID DGDDGDDARA TRGARASGAD ADADAGRNDD DDARRRRERE 
TTSGELTLPQ SFGAVALGER FSSFVTFGNF SEPTSGASGT AREIGIKVEL QTETRRTTLR
DGTKTPIETL RPGEKVDLIV TKDLKELGAH TLVCSATYYD AAGERKYSPQ YFKFNVANPL
SVRTKVRAAP RGRAFLEVCI ENTTRYALLL DSARFDTVDG ILAKDMTPEF GGAAATLHGV
DDSPDAGLPS LGKRAVYRLD PSTGAAHYLF EITRANASEE PLTPQTQLGK LELRWRGAMG
DPGRLQTQVI TAGSAGSTAP SPVAAKMRQS IIVHPRPPDA EDVSTVYAET PFILRAAVEA
LAPIKADACV VRVKDVVSGV YIDGPRAVRV GALSPGQTVN VDIPCVALGL GVQTCPSLVL
CDAVDDAARA APAPLEVFSV IPPPSVVLDA LKRVETIDVA SPPVDVAPSL DAPIDSLL