| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_88828 |
|---|
| Symbol | |
|---|
| ID | 5004702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009366 |
|---|
| Strand | - |
|---|
| Start bp | 412998 |
|---|
| End bp | 415067 |
|---|
| Gene Length | 2070 bp |
|---|
| Protein Length | 689 aa |
|---|
| Translation table | |
|---|
| GC content | 65% |
|---|
| IMG OID | 640420123 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420844 |
|---|
| Protein GI | 145353052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0744382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.113989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCG ACGACGACGA CGCCGGCGAC GCGCTTGGGC GTCCCGCGGC GTCGTCGTCG
ACGGCGCTCG ACGCGTCGGC GCGCGCGTTC GCGCCGACGA CGCGCGGACG CAAGGGCCAG
CGCGCGGACT TTCTGCTGTG CTTCGCGCCG CGCGAGCGAC CGGAGGCGCG CGCGACGCGG
CGCGAACGAC GCGGCGCGCG CTCCGAGCGC GAGGCGAGAC GACGAAAGCC GCGAGGCGCG
CGCTCCAGCT CGCGGGCGCT CTTCTTGCAG GCGAATTTTC GGTTTTTGGT GGCGGACAGC
GCGGATCTGC GCGCGAGCTC GAGGGACGCG GATCGCATGG CGTCGTGGGA GGACGTCGTG
CGCGTGGACG TGGCGAGCGC GGAGGCGTTT TCGTGTCCGG TGTGCCTGGA GGACGGCGCG
GGGGCGATCG CGCCGCAGAC GACGACGTGC GGACACGCGT TTTGTTTTCC GTGCGTCGCG
CGGCACGTGC TGACGACGAG GGACCGGGGG ACGCCGGCGA AGTGCCCGAT GTGTTTCGCG
GAGATTCGAT TGGGGGATTT GCGGTCGGTG TCGCGGCGGT TGATCGCGCC GCCGAGCGCG
GGGAGGACGC AAAAGTTTGC GTTGATGGCG CGGAGACGGG ATTCAAACGT ACCGGCGCGA
CGCACGGCGA AAGGGACGCC GCCGCCGGCG TCGGAGGCGT GGCCGAGAGC GCTACCGGAT
TGTGGATGCG ACGCGTTCGC GAAGTACACG CTCACGAGCG AGGAAGTCGC CATCGCGACG
CAAGAGTTGG AATCCCTCGA ATCGTACGTC GCCGTGTTGA CGGAGCAAAG CGAAATCGAC
GCGGCGAGCG AGTTGCCGTT CGCGCTGGCG TCGATCGACG CCCTAACGCG AAGGCTCGAT
CGATGGGTGG AGCGGCGATG CGCGAGCGAG GGCGTGGCGG CGCCCAAGCC GCGGGCGCCG
CCCGCGGGCG TCGTCGCGCC GACGCCGGCG CCGGCGCCGA AAAGTACGCC ACGCGAGGAG
GCGTTCCCGT CGTTACCACC GCCGGGGAAG AATATGGCGT ATTTGAAAGG TTCAAAGGTG
CGCGTGGAAT CTGCGTTCAC GGATGACGAG GACGAGGACG AGGACGAGGA CGAGGAATCG
GATTCCGAAC CGTCCGCGGA GGATTCTCCC GGTGCGAGCA AGCGTGAAGC CGACGCGACT
ACCGTCTCGC GACGGACGCC TCTCACCGTA TCGACGTCGT CGCCACCGAC GGTGGCGCCG
ACCGCGACGC CGACGAGCGA TCAGCGAACG GATGTTTATT ACTTTTACCA AGCCCCAGAT
GGTCAGCAAG TTTTACTCCA CGGCGCTTGC ATGCGCGTAC TGCTGGAGCA ATTCGGTGCG
TACGAGGCGC TCCCGCTCGA AATCGAAGGT ACTGTCATCG AGCTCGAGCA TCGAACGCAA
GACGAAGACG TACGTCGACG CGCCGCGCAT TTGCGCCACT TGCCGCTGAC CACGGAATTT
GTGATGGTGG AACTGGACAT GAAATCACTC GTTTCAAAGA AAGTCTTGGA CGGACCAGCG
GGAAGTGAGT TACGACAGCG AGCGAAGCGA CGTTCGCAGA AGAACGCGGC GGCGGCGCGC
GCCAAGGCAA AGGAGAAACG CGCTGAGGCG ACGGCAAAGG TGAATTCACA ACCGTTCGCT
AAATCGATTC GCGACGCCAT GCCGGAGTTG GGCGCCACAG GTAAATTGAC GCCAGATACG
TCCATGGACG CCGCCATCGC GAGACAACTC GCGGAGGAAG CCGAAGAGGA GATGGAGCGT
ATGTCGATGT ACGAGGAAGT GCAAAACGCT CGCGGCCCGG GTGGGCGTTC GTTTTCCAAC
ATCGTTGGAT TGGGCTTCGC CTCTGGGGGT CCAAGTTTGA ACTTCAACAC GGAAAGTTTC
GGACCAGCAC TCGGTTCATC GGCGCCGGTG GCGCCGCCAC CCCTATGGGG TGCCCGCGCG
GCGGCGCTGA CGGAGACTGC GATCGAAGGC GATTCGTCCC GCTCTGGGAA GAAGAAGGGG
AAAAAACAAG TCTTGTTTAG AATGGGCTGA
|
|---|
| Protein sequence | MRADDDDAGD ALGRPAASSS TALDASARAF APTTRGRKGQ RADFLLCFAP RERPEARATR
RERRGARSER EARRRKPRGA RSSSRALFLQ ANFRFLVADS ADLRASSRDA DRMASWEDVV
RVDVASAEAF SCPVCLEDGA GAIAPQTTTC GHAFCFPCVA RHVLTTRDRG TPAKCPMCFA
EIRLGDLRSV SRRLIAPPSA GRTQKFALMA RRRDSNVPAR RTAKGTPPPA SEAWPRALPD
CGCDAFAKYT LTSEEVAIAT QELESLESYV AVLTEQSEID AASELPFALA SIDALTRRLD
RWVERRCASE GVAAPKPRAP PAGVVAPTPA PAPKSTPREE AFPSLPPPGK NMAYLKGSKV
RVESAFTDDE DEDEDEDEES DSEPSAEDSP GASKREADAT TVSRRTPLTV STSSPPTVAP
TATPTSDQRT DVYYFYQAPD GQQVLLHGAC MRVLLEQFGA YEALPLEIEG TVIELEHRTQ
DEDVRRRAAH LRHLPLTTEF VMVELDMKSL VSKKVLDGPA GSELRQRAKR RSQKNAAAAR
AKAKEKRAEA TAKVNSQPFA KSIRDAMPEL GATGKLTPDT SMDAAIARQL AEEAEEEMER
MSMYEEVQNA RGPGGRSFSN IVGLGFASGG PSLNFNTESF GPALGSSAPV APPPLWGARA
AALTETAIEG DSSRSGKKKG KKQVLFRMG
|
|---|
| |