Gene OSTLU_88734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88734 
Symbol 
ID5004686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp146601 
End bp147188 
Gene Length588 bp 
Protein Length195 aa 
Translation table 
GC content60% 
IMG OID640420107 
Productpredicted protein 
Protein accessionXP_001420767 
Protein GI145352891 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.6901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.220592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GCGGGTCGTT CGTGCATCAG ATGGCCACCG GGGAGCTCCC TCGCGAGAAG 
TATCTTCGCT ATCTGTCGCA AGACGCGTAC TTCTTGTTTC ATTTCAATCG AGCGTACGCG
CAGGCGCTTC GCCTGGCCGC GGACGTCGAC GAGCAGAGAG TCTTTCACGA ACTCATCGGC
GGCGTGCTCG ACGAGCTGAA GTTACACTCC GCGGCGTGTG AAAAGTGGGG CGTGGACGTG
GACGCCGTCG AGGTGCACGC CGCGAGCCGG GCGTACGTGG AGTTTCTGGA GTCTTTGCAC
GGGAAATCTT CGCTCGAGTT GGTCGCCGGG ATGATTCCGT GCATGCGACT GTATGCGTAC
GTCGGTCGGT ACTTTCTCAC GCGAGCGGAT GCGGGTGTAG ACGGAATTCC CGACCCGCGG
ACGTCACCGT ACGCCGAATG GTTCGAGGCG TACGGTGGGG ATGAGATGGA ATCCCTCGCG
TGTCGTTTAG AGTCGTTATT ACCCGAAGAA ATCGAGGATG AGCGCGCCGT CGATAATTAC
GTCGAGGCGA TTCGTCTTGA ACGTGACTTC TTCGCCGCGC ACGCGTAG
 
Protein sequence
MTASGSFVHQ MATGELPREK YLRYLSQDAY FLFHFNRAYA QALRLAADVD EQRVFHELIG 
GVLDELKLHS AACEKWGVDV DAVEVHAASR AYVEFLESLH GKSSLELVAG MIPCMRLYAY
VGRYFLTRAD AGVDGIPDPR TSPYAEWFEA YGGDEMESLA CRLESLLPEE IEDERAVDNY
VEAIRLERDF FAAHA