Gene OSTLU_88710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88710 
Symbol 
ID5004808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp54313 
End bp55134 
Gene Length822 bp 
Protein Length273 aa 
Translation table 
GC content62% 
IMG OID640420229 
Productpredicted protein 
Protein accessionXP_001420739 
Protein GI145352831 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0116194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00230003 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGCTCGGAT TTCCCGGGAT TCTGAACCTG CCGCGAGGGG CGGTGTCGAG ATGGGACAGT 
AAACCGAGCG CGCTGCGGGA CTTGGCGAGG GATCAGGTGC CGAGACACGT GGCGATCATC
ATGGATGGGA ACTCGCGGTG GGCGGAACGG CGGCGATTGC CGCGGACGAT TGGACACGAA
CGCGGCGTGA ACGCGCTGCG GGGGGTGGTG AAATGCTGCG TGGCTTGGGG CATAAGCACA
CTGACGGTGT TTGCGTTCAG TCAGGAGAAC TGGGGGCGGA ACCAAGCGGA AATTGAAGAG
CTCATGGCGC TCGTGGAGAC GGCGATGCGA GAGGAGTTGC CGTTGCTCGT CAAGGAAGGC
GTGCGCGTGG AAGTCATCGG GGATTTGAGT AAAGTGAACG AGGGCGTGCG CAGTGCGGTG
ACGCGAGCGA TGGAGGCGAC GAAGGATAAC GATTCGTTGC GTCTGGTGGT GGCGTTGAGT
TACGGCGGTC GGCAGGACAT CGTGCAAGCC GCCAAGACGC TCGCGCAAAA GGTTGCGGAC
GGGGAGATGC GCGCCGAGGA CATCGACGAA GCGGCACTGA GCGCGCATTT ATCGACATAC
GACGCACGCG CGGCGACGAA CGAGATCGAT TTCGCGCAGG CGCCGGATTT ATTGATTCGC
ACGAGCGGCG AGCAGCGCCT GAGCAACTTT CTCCTCTGGG ACCTCGCGTA CACCGAACTG
TACTTTGCGC AAATGTTTTG GCCCGAGTTC GGCGAAGCAG AACTGCGCCG GGCGTTATAC
GCCTACGCCA AGCGCGACCG TCGATTCGGC GGTCGCACGT GA
 
Protein sequence
LLGFPGILNL PRGAVSRWDS KPSALRDLAR DQVPRHVAII MDGNSRWAER RRLPRTIGHE 
RGVNALRGVV KCCVAWGIST LTVFAFSQEN WGRNQAEIEE LMALVETAMR EELPLLVKEG
VRVEVIGDLS KVNEGVRSAV TRAMEATKDN DSLRLVVALS YGGRQDIVQA AKTLAQKVAD
GEMRAEDIDE AALSAHLSTY DARAATNEID FAQAPDLLIR TSGEQRLSNF LLWDLAYTEL
YFAQMFWPEF GEAELRRALY AYAKRDRRFG GRT