Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_88710 |
Symbol | |
ID | 5004808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009366 |
Strand | - |
Start bp | 54313 |
End bp | 55134 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | |
GC content | 62% |
IMG OID | 640420229 |
Product | predicted protein |
Protein accession | XP_001420739 |
Protein GI | 145352831 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0116194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00230003 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGCTCGGAT TTCCCGGGAT TCTGAACCTG CCGCGAGGGG CGGTGTCGAG ATGGGACAGT AAACCGAGCG CGCTGCGGGA CTTGGCGAGG GATCAGGTGC CGAGACACGT GGCGATCATC ATGGATGGGA ACTCGCGGTG GGCGGAACGG CGGCGATTGC CGCGGACGAT TGGACACGAA CGCGGCGTGA ACGCGCTGCG GGGGGTGGTG AAATGCTGCG TGGCTTGGGG CATAAGCACA CTGACGGTGT TTGCGTTCAG TCAGGAGAAC TGGGGGCGGA ACCAAGCGGA AATTGAAGAG CTCATGGCGC TCGTGGAGAC GGCGATGCGA GAGGAGTTGC CGTTGCTCGT CAAGGAAGGC GTGCGCGTGG AAGTCATCGG GGATTTGAGT AAAGTGAACG AGGGCGTGCG CAGTGCGGTG ACGCGAGCGA TGGAGGCGAC GAAGGATAAC GATTCGTTGC GTCTGGTGGT GGCGTTGAGT TACGGCGGTC GGCAGGACAT CGTGCAAGCC GCCAAGACGC TCGCGCAAAA GGTTGCGGAC GGGGAGATGC GCGCCGAGGA CATCGACGAA GCGGCACTGA GCGCGCATTT ATCGACATAC GACGCACGCG CGGCGACGAA CGAGATCGAT TTCGCGCAGG CGCCGGATTT ATTGATTCGC ACGAGCGGCG AGCAGCGCCT GAGCAACTTT CTCCTCTGGG ACCTCGCGTA CACCGAACTG TACTTTGCGC AAATGTTTTG GCCCGAGTTC GGCGAAGCAG AACTGCGCCG GGCGTTATAC GCCTACGCCA AGCGCGACCG TCGATTCGGC GGTCGCACGT GA
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Protein sequence | LLGFPGILNL PRGAVSRWDS KPSALRDLAR DQVPRHVAII MDGNSRWAER RRLPRTIGHE RGVNALRGVV KCCVAWGIST LTVFAFSQEN WGRNQAEIEE LMALVETAMR EELPLLVKEG VRVEVIGDLS KVNEGVRSAV TRAMEATKDN DSLRLVVALS YGGRQDIVQA AKTLAQKVAD GEMRAEDIDE AALSAHLSTY DARAATNEID FAQAPDLLIR TSGEQRLSNF LLWDLAYTEL YFAQMFWPEF GEAELRRALY AYAKRDRRFG GRT
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