Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_6551 |
Symbol | |
ID | 5004886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009366 |
Strand | - |
Start bp | 422561 |
End bp | 423079 |
Gene Length | 519 bp |
Protein Length | 173 aa |
Translation table | |
GC content | 67% |
IMG OID | 640420307 |
Product | predicted protein |
Protein accession | XP_001420847 |
Protein GI | 145353059 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5080] Rab GTPase interacting factor, Golgi membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.424156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ACGCTGGATG AAACGATTTG GGCCACCGTC AGGCGCGATT GCGCCGTGGT GCGGCGAAAC TGCGCGGCGG TGCTGCTGCC GATGAACTGG GGGGCGAACG GCGCGACGCG GCTGCGAGAG TGGGACCTGT GGGGACCGCT GGCGTTCGTG CTGACGCTGA GCGCGACGCT GAGCGGCGGC GCGGCGAACG CGAGCGAGAC GTTCAGCGTC GTCTTCGCGA CGGTCGGGCT CGGCGCGGTG GCGCTGACGG CGAACGTGCT GTTGCTGGGC GGGAAGATCA TATTCTTGCA GAGCGTGGCG CTGTTGGGGT ACTGCGTGGT GCCGCTGTGC CTGGCGAGCG CGCTGTGCCT GGCGAGCGAG AATAAGGTGT ACAGATTCAT CGTCGTCGCG GCGGCGGTGA CGTGGAGCAG TAAAGCGAGC GTGCCGTTCG TGAGCGCGGC GATGCCGGCG TCGAGAAGGG CGCTGGCGGT GTATCCGGTG ATGTTGATGT ACGTGTTTCT GGGGTGGTTG TGCGTGGCC
|
Protein sequence | TLDETIWATV RRDCAVVRRN CAAVLLPMNW GANGATRLRE WDLWGPLAFV LTLSATLSGG AANASETFSV VFATVGLGAV ALTANVLLLG GKIIFLQSVA LLGYCVVPLC LASALCLASE NKVYRFIVVA AAVTWSSKAS VPFVSAAMPA SRRALAVYPV MLMYVFLGWL CVA
|
| |