Gene OSTLU_6551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_6551 
Symbol 
ID5004886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp422561 
End bp423079 
Gene Length519 bp 
Protein Length173 aa 
Translation table 
GC content67% 
IMG OID640420307 
Productpredicted protein 
Protein accessionXP_001420847 
Protein GI145353059 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5080] Rab GTPase interacting factor, Golgi membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.424156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACGCTGGATG AAACGATTTG GGCCACCGTC AGGCGCGATT GCGCCGTGGT GCGGCGAAAC 
TGCGCGGCGG TGCTGCTGCC GATGAACTGG GGGGCGAACG GCGCGACGCG GCTGCGAGAG
TGGGACCTGT GGGGACCGCT GGCGTTCGTG CTGACGCTGA GCGCGACGCT GAGCGGCGGC
GCGGCGAACG CGAGCGAGAC GTTCAGCGTC GTCTTCGCGA CGGTCGGGCT CGGCGCGGTG
GCGCTGACGG CGAACGTGCT GTTGCTGGGC GGGAAGATCA TATTCTTGCA GAGCGTGGCG
CTGTTGGGGT ACTGCGTGGT GCCGCTGTGC CTGGCGAGCG CGCTGTGCCT GGCGAGCGAG
AATAAGGTGT ACAGATTCAT CGTCGTCGCG GCGGCGGTGA CGTGGAGCAG TAAAGCGAGC
GTGCCGTTCG TGAGCGCGGC GATGCCGGCG TCGAGAAGGG CGCTGGCGGT GTATCCGGTG
ATGTTGATGT ACGTGTTTCT GGGGTGGTTG TGCGTGGCC
 
Protein sequence
TLDETIWATV RRDCAVVRRN CAAVLLPMNW GANGATRLRE WDLWGPLAFV LTLSATLSGG 
AANASETFSV VFATVGLGAV ALTANVLLLG GKIIFLQSVA LLGYCVVPLC LASALCLASE
NKVYRFIVVA AAVTWSSKAS VPFVSAAMPA SRRALAVYPV MLMYVFLGWL CVA