Gene OSTLU_5242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_5242 
Symbol 
ID5004661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp246127 
End bp246837 
Gene Length711 bp 
Protein Length237 aa 
Translation table 
GC content56% 
IMG OID640420082 
Productpredicted protein 
Protein accessionXP_001420631 
Protein GI145352605 
COG category[R] General function prediction only 
COG ID[COG5152] Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.255836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTCGCATTTG AAGGTTCGAA GACGGTGCGG GCGCGCGGAG ACATGGGGGC GACGGCGGAA 
CTAGAGATCG ATACGAGCAA GGAGATGGAT GGACGAGCGA TGCGAGAACA GGTGCTGAAA
CAAGCCATCG ACCGCGCCGA TGGATTCGAG GACGACAAGA AGTATCGCGG GACGAATGCG
TACGTGGACT ATCGAGCCGG GTTCCGTCGC GAGCAGACGA TTTCGAGCGA GAAGGGCCGA
GGGGCGCACG GTCCGATGCG AGCGGCGACG AATATTCGGT CGACTTTCGT CATGGACTAC
AAACCAGACA TTTGCAAAGA CTACAAGCAA ACCGGTTTCT GTGGATGGGG CGACGCGTGC
AAGTTTTTAC ACGATAGAGG AGATTACAAA CAAGGCTGGC AGCTCGACAA GGATTGGGAG
CAAAAAGAAC AGGCGCGCAA AGCGGCCGAA GCTCGCATGG CCAAGCTCGG CGAAGATGGC
GTCGCGGAAG AGTCCGATGA AGAGTATGTC AACGACATCC CCGAATCTTG CGCGATTTGC
GACACCTCCT GGCTCGAAGC GAAGTTTCCA GTCGCGACGG CGTGCGGACA CTTTTTTTGC
GAGCGCTGCG CGTTGCAACA CAACGCCAAG CAAACGACGT GTTTCACGTG CGACAAAGAG
ACTGGAGGCA CGTTTAACGC CGCTAAAGAA ATCATCAAGC GCGTGAAAGA G
 
Protein sequence
FAFEGSKTVR ARGDMGATAE LEIDTSKEMD GRAMREQVLK QAIDRADGFE DDKKYRGTNA 
YVDYRAGFRR EQTISSEKGR GAHGPMRAAT NIRSTFVMDY KPDICKDYKQ TGFCGWGDAC
KFLHDRGDYK QGWQLDKDWE QKEQARKAAE ARMAKLGEDG VAEESDEEYV NDIPESCAIC
DTSWLEAKFP VATACGHFFC ERCALQHNAK QTTCFTCDKE TGGTFNAAKE IIKRVKE