Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_5242 |
Symbol | |
ID | 5004661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009366 |
Strand | + |
Start bp | 246127 |
End bp | 246837 |
Gene Length | 711 bp |
Protein Length | 237 aa |
Translation table | |
GC content | 56% |
IMG OID | 640420082 |
Product | predicted protein |
Protein accession | XP_001420631 |
Protein GI | 145352605 |
COG category | [R] General function prediction only |
COG ID | [COG5152] Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.255836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTCGCATTTG AAGGTTCGAA GACGGTGCGG GCGCGCGGAG ACATGGGGGC GACGGCGGAA CTAGAGATCG ATACGAGCAA GGAGATGGAT GGACGAGCGA TGCGAGAACA GGTGCTGAAA CAAGCCATCG ACCGCGCCGA TGGATTCGAG GACGACAAGA AGTATCGCGG GACGAATGCG TACGTGGACT ATCGAGCCGG GTTCCGTCGC GAGCAGACGA TTTCGAGCGA GAAGGGCCGA GGGGCGCACG GTCCGATGCG AGCGGCGACG AATATTCGGT CGACTTTCGT CATGGACTAC AAACCAGACA TTTGCAAAGA CTACAAGCAA ACCGGTTTCT GTGGATGGGG CGACGCGTGC AAGTTTTTAC ACGATAGAGG AGATTACAAA CAAGGCTGGC AGCTCGACAA GGATTGGGAG CAAAAAGAAC AGGCGCGCAA AGCGGCCGAA GCTCGCATGG CCAAGCTCGG CGAAGATGGC GTCGCGGAAG AGTCCGATGA AGAGTATGTC AACGACATCC CCGAATCTTG CGCGATTTGC GACACCTCCT GGCTCGAAGC GAAGTTTCCA GTCGCGACGG CGTGCGGACA CTTTTTTTGC GAGCGCTGCG CGTTGCAACA CAACGCCAAG CAAACGACGT GTTTCACGTG CGACAAAGAG ACTGGAGGCA CGTTTAACGC CGCTAAAGAA ATCATCAAGC GCGTGAAAGA G
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Protein sequence | FAFEGSKTVR ARGDMGATAE LEIDTSKEMD GRAMREQVLK QAIDRADGFE DDKKYRGTNA YVDYRAGFRR EQTISSEKGR GAHGPMRAAT NIRSTFVMDY KPDICKDYKQ TGFCGWGDAC KFLHDRGDYK QGWQLDKDWE QKEQARKAAE ARMAKLGEDG VAEESDEEYV NDIPESCAIC DTSWLEAKFP VATACGHFFC ERCALQHNAK QTTCFTCDKE TGGTFNAAKE IIKRVKE
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