| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_51122 |
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| Symbol | |
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| ID | 5004623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009366 |
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| Strand | - |
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| Start bp | 218219 |
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| End bp | 220779 |
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| Gene Length | 2561 bp |
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| Protein Length | 841 aa |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | 640420044 |
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| Product | predicted protein |
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| Protein accession | XP_001420784 |
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| Protein GI | 145352925 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0345053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGAGA CGCTCGCCGA CGTCGCGCGT CCTCGCGCGT GGCGCGCACG CGCGCGCGTC
CAACGCGCGC ATCACCGTCC TCGCGCAGCC GTCGCGCGCG TCGCCGTCCT CGACGACGTC
GCCGCCTACG CCTTGGTGAC AAAGTCGGCT GATGATTTAC TCGACGACGT CCGACGCCTC
AACCGGGACG CGTCGTCGTC GTCGCCGCGA ACGACGAATG CAAACGTCGT GACGTACTCG
CCCAAGGTGT TCGTTCCGCT CACGCGCGCG TGTCGGGACT CGTGCGGATA CTGCGCGTTC
GTCGACTACG AACCGAGCGC GGCTGGAAAG CGCGTGTACA TGACGCTCGA GGAAATCGTC
GACGTGGCGC GACGAGGCGC GGCGGCGGGG GCGACGGAGT GTTTGTTGAC GTTTGGTGAT
CGACCCGAGG CGACGCGGGA GGATGCGCGA GAGGGATTGA GGGAGTTGGG ATGCGCGAGC
ACGGCGGAGT ACGCGGCAAA GGCGTGCGAG GCGGTGTTGC GAGAGACGGG GTTGTTGCCG
CACGTAAACG CGGGTGTGTT GACGAGAGAC GAGTTGAGGA TGCTACGACG CGTGAGCGCG
TCGCAAGGGT TGATGTTGGA GACGACGAGC GAGCGGTTAT TGGGGCCGGG AATGGCGCAC
GACGGGTGTG AGACAAAGCG ACCGAAGACG CGCCTGCGGT GCATCGAGCT CGCGGGAGAG
GAGCGCATCC CGTTCACGTC TGGATTATTG ATTGGGATCG GCGAGACTCG CGAAGAGCGT
ATCGATGCAC TTCTGGCGCT TCGCGATGTA CATGCCAAGC ACGGACACAT TCAAGAGCTC
ATCATACAGA ATTTCTTATC GAAACCCGGC ACCGCGATGG CTGATTTTCC AAATCCTCCG
CTGGAAGAGT TGACGTGGAC GGTGAGCGCA GCTCGCCTAA TTTTTGGCGC AGACATGATT
ATACAGGCGC CACCGAATCT TACACCAGGC GAAGAGGCTG GCTGGCGCGC CCTTTTGCGC
GCCGGTGCGA ATGATTGGGG AGGAATCTCG CCGGGCGTCA CGCCGGACCA CGTCAACGCC
GAGGCGCCAT GGCCGCACAT AGAAGAGCTC GCCACCGTGT GCGCCGATGA AGGTTTCGCG
CTCGTCCCGA GACTGCCAGT GCACCCTAAG TACTTGAGGG TAGACGATGA TCGAGTGAGC
GTCGGGGGAT CCGCAGTTTG GCTTGACGAC AAAGTTTCGC CGTATCTTCG CAAACTCGCC
GACAGCGAGT TTCTCGTTCG CGGTACGACA TGGTCGCCAG GACGTCCGGA TGATGAAAAG
AAAGAGTTTG TGGATATCGT CGGCGTGAAT GGCTCTGTTC CTTGTCGTGG TACCAAGAGG
CGTATATCGA GCGAAGTTCT GGCCGCCATA GCCGCCATAG TGGACGGAAA CTATGAGTTG
GACGACATCG TGACGTGCTT ACAAGCGAGA GGCGCCGATT TCGACAAGGT GTGCGAGGCC
GCGAATACTT TGCGAGAGCA GCAGTGTGGT GATACCGTTA CGTTTGTGAA CAATAGAAAC
ATTAACTATA CGAATATCTG CACGTTGGCG TGCACGTTTT GTTCGTTTTC CAAGGGAAAG
GCTGCAGAAG AACTTCGCGG TTCGCCGTAC CTGCTCGACT TGGACGAAGT CGCAAGGCGA
ACGGCCGAGG CTTGGGAGCG TGGTGCGAGC GAAGTCTGCA TGCAAGGCGG CATTCATCCC
TCGTTCACAG GCGAAGATTA TATGGCTTTT ATCGGAGCTG CGAAACGAGG GGCACCGGAC
ATACACATTC ACGCCTTTTC ACCGCTCGAA ATCGCTCACG GAGCGCAGAC TCTCGGTCTG
AGCGCTCGCG AATACTTGCG TAAACTCAAG GATGCAGGGC TGGGATCGCT CCCAGGTACT
GCTGCCGAGG TTTTGGACGA CCAAGTTCGC GAAACACTCT GTCCAGATAA ACTCACCGCG
AAAGAATGGC TCGATGTCGT CGAAGACGCT CACTTTGTGG GCGTGCCAAC GACGAGCACC
ATCATGTTCG GTCACATTGA CGCCGACGGC CCGCGCGCGT GGGCGCGACA TCTCGTCTCC
ATTCGCGATT TGCATCTCAA GACGGGTGGA TTCACGGAGT TCGTACCACT ACCTTTCGTG
CATTTCGAGG CGCCGACGTA TCGTTTCGGC GCGTCTCGGA AAGGTCCAAC GCTGCGCGAG
TGCATCCTGA TGCACGCCGT CGCGCGTCTC GTGCTGGGAC CGGCGGGAAT CACGAACATT
CAGGCGAGCT GGGTAAAAAT GGGTCCCGAG CTCGCCTCAC TTCTCCTGCA CGCTGGATGC
AACGATATGG GCGGTACACT CATGAATGAA TCCATCACTC GCGCCGCTGG TGCGACGTTT
GGGCAAGAAA TCGACGCGCG CGAAATGCGT CGAATCATCG AAGCCGCCGG CCGCGTTCCG
CTTCAACGCA CCACCTTGTA CGCTCACGCA CCCCAACATC GCGTCGAGCA CCCATCGATC
GCGTAGGACG CGATCGTCGT AGATTGTATG TAGAGTCACT A
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| Protein sequence | MRETLADVAR PRAWRARARV QRAHHRPRAA VARVAVLDDV AAYALVTKSA DDLLDDVRRL
NRDASSSSPR TTNANVVTYS PKVFVPLTRA CRDSCGYCAF VDYEPSAAGK RVYMTLEEIV
DVARRGAAAG ATECLLTFGD RPEATREDAR EGLRELGCAS TAEYAAKACE AVLRETGLLP
HVNAGVLTRD ELRMLRRVSA SQGLMLETTS ERLLGPGMAH DGCETKRPKT RLRCIELAGE
ERIPFTSGLL IGIGETREER IDALLALRDV HAKHGHIQEL IIQNFLSKPG TAMADFPNPP
LEELTWTVSA ARLIFGADMI IQAPPNLTPG EEAGWRALLR AGANDWGGIS PGVTPDHVNA
EAPWPHIEEL ATVCADEGFA LVPRLPVHPK YLRVDDDRVS VGGSAVWLDD KVSPYLRKLA
DSEFLVRGTT WSPGRPDDEK KEFVDIVGVN GSVPCRGTKR RISSEVLAAI AAIVDGNYEL
DDIVTCLQAR GADFDKVCEA ANTLREQQCG DTVTFVNNRN INYTNICTLA CTFCSFSKGK
AAEELRGSPY LLDLDEVARR TAEAWERGAS EVCMQGGIHP SFTGEDYMAF IGAAKRGAPD
IHIHAFSPLE IAHGAQTLGL SAREYLRKLK DAGLGSLPGT AAEVLDDQVR ETLCPDKLTA
KEWLDVVEDA HFVGVPTTST IMFGHIDADG PRAWARHLVS IRDLHLKTGG FTEFVPLPFV
HFEAPTYRFG ASRKGPTLRE CILMHAVARL VLGPAGITNI QASWVKMGPE LASLLLHAGC
NDMGGTLMNE SITRAAGATF GQEIDAREMR RIIEAAGRVP LQRTTLYAHA PQHRVEHPSI
A
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