| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_51081 |
|---|
| Symbol | |
|---|
| ID | 5004874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009366 |
|---|
| Strand | - |
|---|
| Start bp | 386169 |
|---|
| End bp | 388696 |
|---|
| Gene Length | 2528 bp |
|---|
| Protein Length | 839 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640420295 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420835 |
|---|
| Protein GI | 145353031 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0380] Trehalose-6-phosphate synthase
[COG1877] Trehalose-6-phosphatase |
|---|
| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.200411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTCTG CGAAACGAAC AGCGCTGATC GGGGAGGACG CGAACGATGG GAAGCCGAAC
ACGATCGGCG GGTCGAGCGC CGATCTCAGC GGGGCGAGCG GGGCGAGCGA ACCGCGCGTC
GAACGCGTCT TCATCGTCAG TAATTCGTTA CCGCTGAAGA TGCGAGAGGA CGCGGAGGCG
GGGAAACCGT ACGGACACAA GTATGCGTTC GAAAAGGATG GGGATAGCAT TTACGATCAA
TGTCGGGAAG GAGCGGAGGC GAACGGGCAG TACGACGCGG TGATAAACGT CGGACAGTTG
CCGATGCAAG TGCCGTTTGA GTTGCAAGAG GCGGTGGCGA ACGATTTAGA GGCGAGATTT
GATGCGGTGC CGGTGTTTTT GCCCGAAGAT ACCAAGGAGA ACTTTTATAA GGGGTTCTGT
AAACAGTATC TGTGGCCTCT GATGCACTAC GTCTTGCCGA TGTCGCCGTT GGATTCGCGA
TTTCAAAAAC ATCAGTGGCA GGCGTACATC GCGGCGAATA AGCGTTTCGC GGATAAGCTG
ATGGAAGTGG TGTGCAGTGA TGACGATCAA GTGTGGGTGC ACGATTACCA CTTGATGCTT
TTGCCGACGT TTCTGCGTAA ACGCTTCAAC GCCGTCAAGT GTGGTTTCTT TTTGCACTGC
CCGTTTCCGT CGAGCGAAAT CTTCAGAACG ACGCCGAACC GAGATTTAAT CCTGCGCGGA
CTTTTAAATG CCGACTTTGT CGGTTTTCAT ACGTTCGATT ACGCTCGACA CTTTTTGTCG
TGCTGCACGC GGTTGCTCGG ATTAAATCAT AGGATGGAGC GCGGGTCGCT CGTCATCGAC
AACTTCGGCA GACTCGTGTC GGTTAAGATT TGTCCCACTG GCGTGAAGAC GTCGCGTTTG
CGAGATGTTT TAGACGCACA AATGTGCAAG GATCGTCGGA AAGAACTCGT CACCGAAATT
GCGGGGCGCA AAATGTTGCT TGGTCTCGAT GATTTCGACG AGTTCAAGGG AATCGATCAG
AAAATCGCGG CGTTTGAACG CATGCTCGAC GAACACCCAG AAATCGCCGA GCAAATTGTG
CTGTATCAAG TGTGTAATCC ACCTCGCGGA AGTGGGCGGG ACATTGATGA TTTGCGAGCG
ACCGTGGATT CGATGGTGGC GAGAATAAAT GACAAGTATG CAAAGAATGG TGTCAACGTT
GTGAAGTTTG AAGTGAGGCC CGTGCCGCTG CACGAGCGCA TCGCGTTGTA CTCAGTCGCG
GACATCGCTG TGGTCACGGC CACGCGCGAT GGTATGAACC TTGCGCCATA CGAGTACATA
ACTTGTAGAC AGGGTCCGAA TGACGAGTCC CAGGGCACGT CCGATGGTTT CTCGTTGCCA
CGACAATCCT CTTTGATTAT TTCTGAGTTC ACCGGGTGTT CGCCGTCGCT CTCAGGGGCG
CTTCGCGTCA ACCCGTGGCA CGAAGAGGAT GTCGCGGATT CCATGTACAA AGCACTTCAA
ATGAGCGGTC ACGAGCATGA AGCTCGTCAT GAGAAGCACT GGCGCTACGT TAGCGAGCAC
CACGTCGGCT TCTGGGCGCA ATCTTGCCTC GCCGAGCTTC AGCGCGTGAC AGAGAAGGCT
CAGAGCAACC GATGCTACGG TTTGGGTTTC GGGTTGAACT TCCGTGTCGT GCATCTCAGT
TCGACGTTCC GAAAGCTCGA CACGGCCGGT GTGGTGGCCA ACTACCTCAA GGCGACTCGT
CGAAAGCTCG TGATCGATTA CGACGGTACG CTAGTACCAC TGGCATCCTT TGCGCAGCCG
CCGACGGCGC ATTTATTGTC CCTCCTCACC GTCCTCGTAA ATGACGACGC AAACGAGGTG
TGTATCGTGT CTGGACGCGA GCGCGAGACT TTAGACAAGT GGTTCGGTAA TATTCCTGGT
CTTTGCATGG TGGCTGAGCA CGGATACTGG TTCCGCCGCG GATCAGACGT GGCGTGGAAC
GAGCTTGCTC CGAGTGGCAC GGACAACAGC GTGCTCGAGT GGAAAGATAC CGTCCTACCA
ATTTTAGAGC AGTATGCCGA AGCGACGGAC GGTTCGTTCA TCCAGTCCAA AGAAAGTTCT
TGCGTGTGGC ACTATCGAGA CGCCGATCCC GATTTTGGGG CTTGGCAAGC CAAGGAACTT
CTCGATCACC TCGAGAGCGT GTTACACGGC GACCCCGTGG ACGTCATCGC CGGAAATGGC
ACCGTCGAGA TCAAACCCAA GGGCGTGCAC AAAGGTCTGG TGATAAACCA ACTTTTAGAC
ACGCAATCTT CCGCTGACGT CGCCGATTTC GTTCTCGCCG TTGGCGACGA CCGTTCGGAC
GAGGACATGT TCGTCGCCGT CAACACGCAC GCGCAGCTCC CGCTCTACGC CGGCGCGTCC
ATTTACACAT CAACCATAGG TCAAAAACCG AGCAAGGCGC CTGCGTATCT CGACGACACC
GACGACGTGG TCAACATGTT GCAAACGTTG GCTCAATACA ACGTCTGCCA CAGACACTGA
TTCAATTT
|
|---|
| Protein sequence | MWSAKRTALI GEDANDGKPN TIGGSSADLS GASGASEPRV ERVFIVSNSL PLKMREDAEA
GKPYGHKYAF EKDGDSIYDQ CREGAEANGQ YDAVINVGQL PMQVPFELQE AVANDLEARF
DAVPVFLPED TKENFYKGFC KQYLWPLMHY VLPMSPLDSR FQKHQWQAYI AANKRFADKL
MEVVCSDDDQ VWVHDYHLML LPTFLRKRFN AVKCGFFLHC PFPSSEIFRT TPNRDLILRG
LLNADFVGFH TFDYARHFLS CCTRLLGLNH RMERGSLVID NFGRLVSVKI CPTGVKTSRL
RDVLDAQMCK DRRKELVTEI AGRKMLLGLD DFDEFKGIDQ KIAAFERMLD EHPEIAEQIV
LYQVCNPPRG SGRDIDDLRA TVDSMVARIN DKYAKNGVNV VKFEVRPVPL HERIALYSVA
DIAVVTATRD GMNLAPYEYI TCRQGPNDES QGTSDGFSLP RQSSLIISEF TGCSPSLSGA
LRVNPWHEED VADSMYKALQ MSGHEHEARH EKHWRYVSEH HVGFWAQSCL AELQRVTEKA
QSNRCYGLGF GLNFRVVHLS STFRKLDTAG VVANYLKATR RKLVIDYDGT LVPLASFAQP
PTAHLLSLLT VLVNDDANEV CIVSGRERET LDKWFGNIPG LCMVAEHGYW FRRGSDVAWN
ELAPSGTDNS VLEWKDTVLP ILEQYAEATD GSFIQSKESS CVWHYRDADP DFGAWQAKEL
LDHLESVLHG DPVDVIAGNG TVEIKPKGVH KGLVINQLLD TQSSADVADF VLAVGDDRSD
EDMFVAVNTH AQLPLYAGAS IYTSTIGQKP SKAPAYLDDT DDVVNMLQTL AQYNVCHRH
|
|---|
| |