Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_39499 |
Symbol | |
ID | 5004607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009366 |
Strand | - |
Start bp | 163592 |
End bp | 165154 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | |
GC content | 53% |
IMG OID | 640420028 |
Product | predicted protein |
Protein accession | XP_001420771 |
Protein GI | 145352899 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5021] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00243208 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACTT CAGCGTCTCG CATTTTACTC TTGGACGGCG ACGAACCGCT CGTTACGGCT CGCAATGTTT CGTTGCCTGA AGAATCGTTC ATTCATGGAA AGCTCACTGG AAAGCTCGCG CGTCAGTTGC AAGATACTTT GACGCTTTGC GGGTCAGCGA CGCCGACGTG GTGCACTGCA CTCGCTCGAG TCTGCCCTTG GTTGTTCCCT TTCGAGCTTC GTCACAAGCT CTTCAAATGC GTCTCCTTTT CTCTGTCTCG CACGCTCCAT CACCTCCATG GCAATGGGAG CGATAGTGGG GCGGTAACTA CAGATGGTGG ACGCGAAATT CGAATCGGTC GTTTACAGCG ACAAAAAGTC CGAGTGAATC GAGGGCAAAT CTTCGAAAGC GCAAAGAAGG TGTTCGACAT TCCAAACACG CTCAAGATGG TGCTAGAGGT CGAGTTTTTC GAAGAGGTGG GCACTGGTAC TGGACCAACG CTTGAGTTCT TCACCTTGCT ATCGAAGCAG TTCAAGCGTC GCAAGTTGAA TCTCTGGCGG GACTCTGGTG TGGCAAACGA GGATGATCTC GTCGTAGCTC CTCACGGTTT GTTCCCGGCG CCAATCACCC CGCCTCGGCT CGGCGGCAAG ACTCACGCAA GTCGTCTGAA GAACTTCAAA CTTCTTGGTC AATCGATAGG CAAAGTTTTA CAAGATGGTC GAATGCTAGA TTTACCTCTG GCGCCGGCGT TTTATCGAAT GCTTCTCGGG CGATCGCTGG GACTCCACGA TCTCATCGAA ATTGATCCTG GTCTCGGAAA CACGTTGCGA CGACTCGACG CAGCCGCGAA TGAGATCGAG ACCATGAAGC GCGAAGGTCG ACCCGAAAGT GAATGGAGAA ACGTCACTGT TGACGGAGTG AATATCGAAG ACCTGTGTCT CACGTTTGTC ATCCCGGGAG CTTCCATGGA ACTCATCAAG GGTGGTTCGG AAGTTGGCGT GAACGAGGTC AACTTGCGAG AGTACGTGGA CACCATCGTC GACGCGTGCG TAGGATCTGG CGTCGCGGCT TATTTTGAAT CAGTTCGTAC TGGTTTGGAA CAAGTCGTTC CTCTCGCTAG GCTGCAGATG TTCAACGAAA GCGAACTGGA AGCAGTCATT TGCGGACAAG GTGAACAGTG GACGCCAGAA ATGCTCACCG AGTGCATTAC TTTTGATCAC GGCTACAATG CGCTTTCTCC GCCGATCAAG AACTTCTGTG ACATTCTCAG TGCTTTCACG CCGAATCAAC AACGGTCATT CATGCGATTC GTCACTGGTG CACCGAGGCT TCCTCCTGGC GGCCTAGCGT CACTTCAACC GCGTCTCACT GTGGTTTGCA AGCAACCTTC CTCAACGGTT GGTTTGTCAT CCATCGACTC TGCTCCCGTC GCGGCCGGAA CGCCGCTGGC GGACGGCGAC TTGCCTTCTG CGATGACTTG CGCGAGTTAC TTAAAGCTTC CGCCGTACTC ATGCAAGGAA ATCATGCTGG AACGTTTAAC TTACGCGATG AGCGAGGGGC AAGGAAGCTT TGATCTCTCC TAA
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Protein sequence | MSTSASRILL LDGDEPLVTA RNVSLPEESF IHGKLTGKLA RQLQDTLTLC GSATPTWCTA LARVCPWLFP FELRHKLFKC VSFSLSRTLH HLHGNGSDSG AVTTDGGREI RIGRLQRQKV RVNRGQIFES AKKVFDIPNT LKMVLEVEFF EEVGTGTGPT LEFFTLLSKQ FKRRKLNLWR DSGVANEDDL VVAPHGLFPA PITPPRLGGK THASRLKNFK LLGQSIGKVL QDGRMLDLPL APAFYRMLLG RSLGLHDLIE IDPGLGNTLR RLDAAANEIE TMKREGRPES EWRNVTVDGV NIEDLCLTFV IPGASMELIK GGSEVGVNEV NLREYVDTIV DACVGSGVAA YFESVRTGLE QVVPLARLQM FNESELEAVI CGQGEQWTPE MLTECITFDH GYNALSPPIK NFCDILSAFT PNQQRSFMRF VTGAPRLPPG GLASLQPRLT VVCKQPSSTV GLSSIDSAPV AAGTPLADGD LPSAMTCASY LKLPPYSCKE IMLERLTYAM SEGQGSFDLS
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