Gene OSTLU_39384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_39384 
Symbol 
ID5004624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp226790 
End bp227170 
Gene Length381 bp 
Protein Length126 aa 
Translation table 
GC content60% 
IMG OID640420045 
Productpredicted protein 
Protein accessionXP_001420788 
Protein GI145352933 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.447648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.30848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA CGTGGCATCT CAGCGCGGTG GCGAGCCTGG TGGAGAACCT GGACAAGCGC 
CTGCTCGTCG CGCTGCGCGA CGGCTCGAAC ATCATCGGCA CGCTGCGATC GTTCGACCAA
TTCGCAAACA TCGTCCTCGA GAGCGCGGTC GAGCGCATCA TCGTCGGAAA GATGTTCAGC
GATATCCCAC TCGGATTGTA CATCGTGCGA GGCGAGAACG TCGTGCTCAT GGGCGACGTC
GGGGCGAACG GGGACTTGGA CGGCACGGAA GGGTTGATTG AGGTGGACAA CGCGGAGATC
ATACGGGCGA GGGAGGCGGA TCAGACCGCG GAGGCGATGA AGGGAGACAT CTTGAAACGA
ATGGACTTTT TAGATGAGTG A
 
Protein sequence
MTDTWHLSAV ASLVENLDKR LLVALRDGSN IIGTLRSFDQ FANIVLESAV ERIIVGKMFS 
DIPLGLYIVR GENVVLMGDV GANGDLDGTE GLIEVDNAEI IRAREADQTA EAMKGDILKR
MDFLDE