Gene OSTLU_39332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_39332 
Symbol 
ID5004672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp112969 
End bp113817 
Gene Length849 bp 
Protein Length282 aa 
Translation table 
GC content57% 
IMG OID640420093 
Productpredicted protein 
Protein accessionXP_001420758 
Protein GI145352872 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.374416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0702589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCG GTCGGCATCG CATCGCGTGC GCGCAAATGA CGTCCACGGC TGACTTTCAG 
CACAATCTGC AGACAGTCAC CGAGCTCTGC AAACGCGCGA AAGCCGAAGC GTGCGAGGCG
CTATTTTTGC CCGAAGCGTT CGCGCGCATC GGTGCGACGG ACGCGTCGTA CGCCGAGCCT
CTGGATGGGC CCATCGTGCG CGCTTGTTGC GCGCTGGCGA AGGAGTATGG GCTTTGGATG
AGTTTGGGCG GCTACGCCGA GCGGGACGGC GACGGGAGGA AACGATTCAA TTCGCACGTC
ATGATCGATC CTCGATCGGG AGAAATCAGT GGAGATGTGT ACCGTAAAAT TCATTTATTC
GATACCGACG CCGCGGTGGG CGTTGATGGC GGCGGGATGC GCGAGAGCGA TTACACGCGC
GCCGGGACGA CGTTGGCTTC GTATGATACG ACGTTTGGTA AAGTTGGGGC GTCGATATGT
TATGATTTAC GATTTCCGGA CGTGTATCAG GCGCTACGAT TCGAACACGA AGCGGACGTC
ATCTGTGTGC CGAGTGCGTT CACGAAATCC ACGGGCCAAG CTCACTGGGA AGTTCTCCTA
AGAGCGAGAG CGATTGAAAC GCAATGTTAC GTCGTCGCGG CCGCGCAAGC AGGTAAGCAC
GGGGAAACGA GAGAAAGCTA CGGGCACGCC ATGGTGATCG ATCCATGGGG GCGAATTGTG
GCGAAGATGG ATGATCCATC GAACGAGGTC GGCATCGCGG TGGCTGAAAT TGACCTCGCT
CTAGTCGATT CAATTCGCAC ACAGATGCCA TTAGCCGAAC ATAGGAGGCG AGTGAGAGCA
GAGTTTTAG
 
Protein sequence
MPRGRHRIAC AQMTSTADFQ HNLQTVTELC KRAKAEACEA LFLPEAFARI GATDASYAEP 
LDGPIVRACC ALAKEYGLWM SLGGYAERDG DGRKRFNSHV MIDPRSGEIS GDVYRKIHLF
DTDAAVGVDG GGMRESDYTR AGTTLASYDT TFGKVGASIC YDLRFPDVYQ ALRFEHEADV
ICVPSAFTKS TGQAHWEVLL RARAIETQCY VVAAAQAGKH GETRESYGHA MVIDPWGRIV
AKMDDPSNEV GIAVAEIDLA LVDSIRTQMP LAEHRRRVRA EF