Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_26790 |
Symbol | |
ID | 5004621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009366 |
Strand | - |
Start bp | 213480 |
End bp | 214946 |
Gene Length | 1467 bp |
Protein Length | 469 aa |
Translation table | |
GC content | 67% |
IMG OID | 640420042 |
Product | predicted protein |
Protein accession | XP_001420783 |
Protein GI | 145352923 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.982016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00180742 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GACGCGCGAG CGGTCGATGC GCGCGCCCGC GGACGCGGCG ATCGATTGGC GCGCGCCGTC CGCGGGCGCG CTCGCGTGCC TGCTCGCGGT GGCGATCACG AACTTTGGCG TCGGTGGCGC GCTGTTCGGA GGACGAGGAT GGCGCGCGTG GCAACCGTTC GCGCGAGGAC GATCGTGGAG GTTCACGCTG GCGCAAGCGA TCGGATGGAC GCTGGCGAGC GCGTCGCTGG CGTGCGTGAT GGCGTGCGGG ACGCTGGTGT GGCGAGACGC GAGGGACGCG AGGGACGACG GGACGCGCGA GCGGCGACTG GCGGTGGCGG CGCTGAGTTG GACGAGCCTG GGACTGAGCG TCGCGAGCGA GGCGGCGGTG GCGGCGTCGC TGGCGTTCTT CGACGTCCAG GACGAGGGCG AGGCGGGGCG AGGCGCGGCG AGGGGAAGGG AAGGTTTGGA TTTTAGAGAC GTCGCGCGCG TCGCGACGCT GTTGTCCATC GCGCACGTGT TGCACGCGCC GCACGCGGTG ATTTTCGCGA CGCTGGCGAC GGTGTACGCG CTCGGGTCGT CGGGAGCGCT GGCGTCCATC GTTGTTCTGT ACGCGAGCAC GTATTTCTTG CAGCGCGATC TCGAGCGCGG GCGCCGGAAG TGGGACGCGT TTCGAGCGTG GTCGTCGCGA TGGATAGAGG GCGCGGCGAA GGCGTGGCAC GGGAGCGTGC GCATGATTCA CGACGGCGCG CACGGCGCGG GCTCGACGCC TCTCGTCTTT GCCTATCACC CGCACTCGCT CATTCCGGCG GGCGCCGTGT GGTTTCACTT TTTACCTCAG TTTGGTCGTC GCTTTGAAAA CGTCAAGCCC GTGACGTTGG CCGCGAGCGT TCTTTTCAAG CCGCCGTTCG TGCGAGAGCT CGCCGCGTGG TTGGGCGTGC GCAGCGTGTC GCAAGAAATA TTTCGTTCGA CGCTTCGTCA CGAGCGCGCG GTCGTCGTGT GTCCGGGCGG TCAGGGCGAG ATGTGCGAGC ACGTCGGCGG ATTGAAGGAG GAGACCATCA CGCTCTGCAC GAAACATCGC GGGTTCGTTC GACTCGCCAT CGAAGAAAAA GCGCGTCTCG TGCCCGTCGT GTGTTTCGGC GAGAGTAGCA GCTGGCGCAA TCTCTTGCGG CACCCCGGTC GATATTTGTA CAGACGCTTT CGCGTCGCGA CGCCGCTTTT AGCGGTGGGC TACCTCGGCA TTCTCCCGAT TCCGGCCCGA GTGCCGCTCA CGTTCGTCGT CGGCGACCCG ATGTCGCTTC CCGAGCCCGA TGACGCGGGA CGAGCGAGGG AGAGCGACGT TGAGATCGCT CACGCGGCGT ATTACCGCGA GGTGGCGCGC TTGTTCGCAA AGCACAAGGG CGCGAGCGGA TTTCCGAATT TAAACTTGAA ATTGCTGCAC GAGTGACGCG ACGCGTCGAA TCGAGCGCCC CCGTTTCACC GGCAATC
|
Protein sequence | MRAPADAAID WRAPSAGALA CLLAVAITNF GVGGALFGGR GWRAWQPFAR GRSWRFTLAQ AIGWTLASAS LACVMACGTL VWRDARDARD DGTRERRLAV AALSWTSLGL SVASEAAVAA SLAFFDVQDE GEAGRGAARG REGLDFRDVA RVATLLSIAH VLHAPHAVIF ATLATVYALG SSGALASIVV LYASTYFLQR DLERGRRKWD AFRAWSSRWI EGAAKAWHGS VRMIHDGAHG AGSTPLVFAY HPHSLIPAGA VWFHFLPQFG RRFENVKPVT LAASVLFKPP FVRELAAWLG VRSVSQEIFR STLRHERAVV VCPGGQGEMC EHVGGLKEET ITLCTKHRGF VRLAIEEKAR LVPVVCFGES SSWRNLLRHP GRYLYRRFRV ATPLLAVGYL GILPIPARVP LTFVVGDPMS LPEPDDAGRA RESDVEIAHA AYYREVARLF AKHKGASGFP NLNLKLLHE
|
| |