| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_26716 |
|---|
| Symbol | GTF3501 |
|---|
| ID | 5004820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009366 |
|---|
| Strand | + |
|---|
| Start bp | 91567 |
|---|
| End bp | 92999 |
|---|
| Gene Length | 1433 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 640420241 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420584 |
|---|
| Protein GI | 145352509 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.258569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.155129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGGCGTCGCG CGGCGTCCGT CGCGTCGTCT CGCGCGCGTC GTCGACGGCG TCTCGACGCG
CGCGATCGCG GCGCGCCGAT CCGACGCGTC GACGCGCGAT CGCGAGCGCG CGATGAGCGA
CGCGGAGGAC GAAGATCTCA CCGCGATCGT CGAGGCGGGC GAGGACGCGG TCGACCGGAG
CGTGCACCCG AGCGGGATCG TGCCGGTGCT GCAGTGCGTG TCGAGCGAGG CGAAAACCCG
CGCGCACTCG CGCGCGGCGC TCGACGCGCG GAAGAGCGCG GCGTCGGGGA GGCGCGGCGA
GGGAATTCAT TCGGCGCGGA ATTCAATTGG CGCGACGCAT TCGGCGCGCG CGGGAAGCGG
CGCGGACGAA GGCGAAGCGA GCGTCGCGAG GGCGATGGAC TGACGACGCG ATGCGCGCGC
GTAGGAATAT CGTGGCGACG GTGAACCTGG ACTGTAAGCT GGATCTGAAG ACGATCGCGT
TTCACGCGAG AAACGTCGAG TATAATCCAA AGGTGCGGCA ACCCTAAGGC GACGCGGCGA
GAGACGCGCG AAACGCGCGC GATGGGTGCG ACGATGACTG ACGACGAACG ACGGTGGTTT
GAATGCGCGT AGCGATTCGC GGCGGCGATC ATGCGGATTC GTAATCCGAA GACGACGGCG
TTGATTTTCA GCTCGGGCAA GATGGTGTGC ACGGGCGCGA AGACGGAGGC GTTGGCGCGC
GAGGCGGCGC GAAAATACGC CAAGGTCATC ATCAAGCTCG GATTTCCCGC GCAATTCAAA
GACTTTAAGA TTCAAAACAT GGTCGGTTCG TGCGACGTGC AGTTTCCGAT TCGATTGGAA
GGCTTGGCTT GGCAGCACGG CCACTTCGCG CAGTACGAGC CCGAACTCTT TCCGGGTTTG
ATTTACCGCA TGCAAATGCC CAAGATTGTG CTCTTAATCT TCGTGTCGGG GAAGATTGTG
TTGACCGGCG GCAAGCGTCG CGAGGATATA TACCAGGCGT TCGAGAATAT ATACCCCGTG
CTCACAGAGT TTAAAAAGCT CGCGCAGCCG GACGAAGCCG CCGCGGCGCC CAAGGCGCTC
CCGGCGGCCA AGGGGAAAAA ATAGAGCGAT CAGCACCAAA TAGAAACACA CACACAGAGG
GGAGAGAGAA AGAGGGAAAC GCAGCGCGCG CGCGCGGAGA CGGAGACAGA GGAGAGGAGA
AGAGAGAGAA GAGAAGAGAA GAGACGGAGG AGAATTTCAA ACCAAAAGTA GTAGAGCTAG
CCGACGCGCG TCGCATCTCG AGACCACCGC GCGCGCGTGT CGCGGTCCGG GCGTTCGTCC
CACCGCGCGC CCGCGCGTTT CTCGAGTCGC GCACGCCGAT ACAACATTCG CCTCATCGCG
ACGACGAGAG CTCGTCCGCG CGTGTAATCG CGAACCAACG TCAAAACCAT CAA
|
|---|
| Protein sequence | MSDAEDEDLT AIVEAGEDAV DRSVHPSGIV PVLQNIVATV NLDCKLDLKT IAFHARNVEY
NPKRFAAAIM RIRNPKTTAL IFSSGKMVCT GAKTEALARE AARKYAKVII KLGFPAQFKD
FKIQNMVGSC DVQFPIRLEG LAWQHGHFAQ YEPELFPGLI YRMQMPKIVL LIFVSGKIVL
TGGKRREDIY QAFENIYPVL TEFKKLAQPD EAAAAPKALP AAKGKK
|
|---|
| |