Gene OSTLU_25282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_25282 
SymbolSIR1 
ID5004748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp25855 
End bp28196 
Gene Length2342 bp 
Protein Length690 aa 
Translation table 
GC content61% 
IMG OID640420169 
Productsulfite reductase 
Protein accessionXP_001420730 
Protein GI145352813 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID[TIGR02042] ferredoxin-sulfite reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCGACGCGA ACGCGACGCG ACGCGACGCG ACGCGACGCG AACGTCGCGA ACGCTCGACC 
GGTCGACGCC GTCGAAGACC TCGCGCGCGC CGACGCGCGA ACGCGACGCG AATCGCGACG
TCGCGAATGA AAATCGGTGC CGAGCGATCG ACCATGGCGC GCGCGGTGCC GACGCCGGCG
ACGCGAGCGC ACCGCGCGGT GACGCGCGCG GGGACGACGG TGAAGCGCGC GAAGAACCGA
CGGTGCGTCG TGACGAACGT CGCGACGCCG AGCTCGGGCG CGCAGAAGGA ACCGGCGAAG
CGAAGCAAGG TTGAAATCAT CAAGGAAAAC AGCGACTACC TGCGACACCC GCTGATCGAG
GAGTTGGCGA CGACGGCGTC GAACATCTCC GAGGACGCGG CGCAGTTGTA TAAGTTTCAC
GGCGGGTATC AACAGGACGA TCGAGAGAAG CGAGCGTTCG GGGAGGGGAA GTTTTATCAA
TTCATGATGC GCACGAAGCA GCCCGCGGGC AAGGTGCCGA ACAAGTTGTA CCTGACCATG
GATGACTTGG CGAACACGCA CGGGAACGGA ACGCTGCGAT TGACGACGCG ACAAACGTAT
CAATTGCACG GAATCTTGAA GAGCGACCTG AAGGAAACGT TCGCGACGGT GATTCGTAAC
ATGGGTTCAA CGTTGGGGGC GTGCGGAGAC ATCAATCGCA ACGTCACCGC GTCTCCGGCG
CCGTACGCCA ACAAACCGGA GTATGATATC GCGCAAGAAC TGGCCAAAGA TATCGCCGAC
TTGTTGGCGC CGCAAAGCGG GGCGTATTAC GACGTCTGGC TCGACGGCGA GCAAATCATG
ACGGCTGAAA AGCCCGAAGT GACGGCGGCG CGCATGGAAA ACCGCCACGG CACCAACTTT
GAGGGTTCGC CCGAACCCAT TTACGGTTCG TTATTCTTGC CGCGTAAGTT TAAGATTGGC
GTCACCGTGG AGGGCGATAA CCACATCGAC GTCTTGACGA ACGATATCGG CATCGTCGTC
GTCATGCGCG ACGGCAAGCA CGTCGGGTAC AACGTTTACG TCGGCGGTGG CATGGGGCGC
TCGCACCGCA ACGACGCCAC GTTCCCGCGG GCAGCCACCC TTCTCGGTTT CTGCGGACCG
CGCGACATCT TGTACGCGGT CAAGGCCATC ACGTGCACGC AGCGTGACTA CGGTCGCCGC
GATGATCGCA AGCAGAGTAG ATTGAAGTAC TTGGTCGAGA GCTGGGGCAT GGAGCGATTC
AAGACGGTGA CGGAGCAATA CTACGGCAAG AAGTTTGAAG CCGGCGTTGA GTTGGCGCCG
TTCGAATTCC CTACGTACTT GGGATGGAAC GAACAAGGCG ACGGTAAGCT TTGGTACGGT
GTGCACGTCC AAAACGGTCG TCTTCGTGGC GAAATGAGGA AGGCTTTGCG CAACGTCATC
GAGCGATACG AACTTCCGGT TCGTCTCACC GCTCAGCAAG ATATGTTGCT CACCGACGTC
GATCCGGCGT GGAAGGCGGA TATCATGGCC ACTTTGCAAG CCGCGGGCGT GAAAGACGCG
TCCGAAGTCG ACGCTCTCGA ACGTCTCTCC ATGGCGTGCC CGGCGTTACC TTTGTGCGGT
CTCGCCATCA CCGAAGCCGA GCGCGGTTTG CCGGAGATTA ACGCGCGTTT GCGCACGACC
ATGACCAAGG TTGGCTTGGC GATGTCGGAC GACTTAGTCA TTCGTATGAC TGGTTGCCCC
AACGGTTGCG CGCGTCCGTA CATGGCTGAG CTCGGTTTCG TCGGCGACGG TCCGGCGAGC
TACCAAATTT GGCTCGGAGG CACGCGCGCG ATGACGGGCG TGTCGAGCGC GTACGCCGAG
CGCGTCAAGG TGGATGACAT CGAAACGTTC TTTGAGCCCA TCTTTGCCAT GTGGGCGCAG
CAGCGCAATG CGGGTGAGTT CTTCGGCAAC TTTATCAATC GCGTCGGGTT CGACGCGCTT
CGCGCGTTTT GCGACTCGTA CGTTCCGAGC GCCGCCCCCG TCGCCGCCGC CGCCGCCGCC
GCGCCGACCG CCGCCGCCGT CGAGACCGTC GGGCGTTTGC CGCGCGTCAT GATCGAGCGC
GATGCGTTCG AGGCGCTTCA AGCGTACGCT GAGAAGAAGA ACACCACCTT AACCCAGGCG
ACGACGGACG CGATTCGCAA GATGATCGCC GAAGCCTAAA CGACGTCTTT TTGTACCAAC
GCCGAGAATT TATGACGGCG TCCGCCGCGG CGCCCGGCGC CTTCCATGCC CTTACGTTCT
TTCATTCGAT CGTTCACACA TTTATCCACC CACACTTGTC GCGCCGTCCT ACGCGGGCGC
TT
 
Protein sequence
MKIGAERSTM ARAVPTPATR AHRAVTRAGT TVKRAKNRRC VVTNVATPSS GAQKEPAKRS 
KVEIIKENSD YLRHPLIEEL ATTASNISED AAQLYKFHGG YQQDDREKRA FGEGKFYQFM
MRTKQPAGKV PNKLYLTMDD LANTHGNGTL RLTTRQTYQL HGILKSDLKE TFATVIRNMG
STLGACGDIN RNVTASPAPY ANKPEYDIAQ ELAKDIADLL APQSGAYYDV WLDGEQIMTA
EKPEVTAARM ENRHGTNFEG SPEPIYGSLF LPRKFKIGVT VEGDNHIDVL TNDIGIVVVM
RDGKHVGYNV YVGGGMGRSH RNDATFPRAA TLLGFCGPRD ILYAVKAITC TQRDYGRRDD
RKQSRLKYLV ESWGMERFKT VTEQYYGKKF EAGVELAPFE FPTYLGWNEQ GDGKLWYGVH
VQNGRLRGEM RKALRNVIER YELPVRLTAQ QDMLLTDVDP AWKADIMATL QAAGVKDASE
VDALERLSMA CPALPLCGLA ITEAERGLPE INARLRTTMT KVGLAMSDDL VIRMTGCPNG
CARPYMAELG FVGDGPASYQ IWLGGTRAMT GVSSAYAERV KVDDIETFFE PIFAMWAQQR
NAGEFFGNFI NRVGFDALRA FCDSYVPSAA PVAAAAAAAP TAAAVETVGR LPRVMIERDA
FEALQAYAEK KNTTLTQATT DAIRKMIAEA