| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25275 |
|---|
| Symbol | |
|---|
| ID | 5004635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009366 |
|---|
| Strand | - |
|---|
| Start bp | 629 |
|---|
| End bp | 2411 |
|---|
| Gene Length | 1783 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 640420056 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420718 |
|---|
| Protein GI | 145352788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TCGCGCGTTC ACGAATTAAT CATGAGCGAC GCGCGCTATG TCGGTGTGAT GACAGAAACC
CAGGTATGAG AGACGAACGC GGACACTCGA CGAAAGCATT TGGTAGGACT TCGCATGAGG
AATTAACTAA CTCGACACGC ATTTTTCATT CGCCGTTCAG AGTTACGTGG AATACCTATG
GAGTCAAAGT TCGTGGGACG TCCCGCTGTT CCATGCCCAT CATGTTCTGA ACTTGCTTCA
ACGACTGCTC TTCGCCACGC TGTCCATGGT GGCGAATGCG GGAATTTTGC ATTTCCATTG
GACGACTCCA CCGCACCCAA AGTTTACGGT GCTCCGTAAG TCTCGAATAA TCATCCGAAC
GCATCTCATA AGCGGCACTA TCAATGTCTG TCTACCAATT GTGGCGTTCT GCAGCGCAAA
TCCAAAGGTT TCGACGCCAA TTATGTGGAT CACAGTGGGG TTCGATGTAA TACATTTGAT
GACGGTCATC GCTCAAACAC CCAACGTAAA TGGGCAGAGA TTGCTCACAG TCCCAGCATA
CCAGTTCATT GCATTGGTTA AGGTTGTGAG CGTTGCTGGC TTGATTCATG CCCTTCTCGA
CGACTCGCTC TATGAGCTGG AACGGTTGGA GTGGCTGTGG ACGGTTTGGG CGAATCATCA
AACCTACGCT TGGGTACGAG TATGGATGGT GTTGCTTTAC TTTTGTCAAG CCGCTCGCGA
AAGCCGATAC ACCTTGGCTG TGCTAATTGC AGGAACTATT GGCGCTGGAC AGGCCTATGG
TTTCTCCATT ATGATTTTCT TGATCGTTTG GTTGATTGGT TTCAATTTAT GGCTTCGTCG
AAAGACGTAC ACTCTCGCTG CGAGATTTGC TGAATCGAAA CATACCGGCG ATGAACAACG
TGAGTTGAAT TTGGAGATGA GTGCGATGTT GCAGTACTTT CACGAGGCCC ATCATGGGTT
ATATCATGAC GTTAGATACA AGCATCAACC CGAAGTCGTT CAGAAAATTC TCTTCGAAAC
TGGATACTTG AAAGTTGTCC AGGATGCACG AGGGAAGGAC ACTTCGCAGC TAGCACCGTT
AAGAACTATT CCAGACGATG TCCAAGCACG CTGTGTTTTT GAATCTGTCG ATTTCGACAA
CAGTGGTAGT CTTGATCTCC TCGAGCTCGC ACAAATTTTC ATCACCAACG GTGTATCAAC
CGAAACCACG CAAAAGATGT GCGAAGAAGC CTTTGGTAAA TTTGATATCA ACAACGATGG
GTTAATCGAT TTGAATGAAT TCACTATGGC TTTCAAACCT TACTGGGCGT ATCAGTTTGC
CGAAGTTTAT GTCATTCTTG GAGACGCGCC GCAGCTGATG AAAAACGTCA TCAACGTTCC
GCTTCACAGC ACAGCGATGG GATGCCCATT CGGAGCCGCG CACAGTATTC CGCTCGATTT
CGGCTCCGAA GTAATAAGTT GGACCGATCT CGTCCAATCC AAGAATGGAA AAAGTCTTGA
CCGCGCTCTA TCGCGCGTGA GGTCAAAATT GAAACCAGCC GTACGTTGAT TCGCGTACTG
ACGCGATGCT TCGATGTTAA GAACTTTGCC ACAGGTAGGC GCGGCGTGAG AACGTCAGCG
TTCATCGGTA AGGTTGCGTC ATTTGGCGTG GTCGTCGCTG CAGTCGTGGT GCTTCGTCGG
CGACGCGACG GGAACGCCGA CGCCATGGAA TCGAATGAAC CGCTGTATGA CAAGGGCCAG
CGAGCTCCTG GCGGTAACGG TACGGCGCTG TGAGAGTCGC CGT
|
|---|
| Protein sequence | MSDARYVGVM TETQSYVEYL WSQSSWDVPL FHAHHVLNLL QRLLFATLSM VANAGILHFH
WTTPPHPKFT VLRKSRIIIR THLISGTINV CLPIVAFCSA NPKVSTPIMW ITVGFDVIHL
MTVIAQTPNV NGQRLLTVPA YQFIALVKVV SVAGLIHALL DDSLYELERL EWLWTVWANH
QTYAWVRVWM VLLYFCQAAR ESRYTLAVLI AGTIGAGQAY GFSIMIFLIV WLIGFNLWLR
RKTYTLAARF AESKHTGDEQ RELNLEMSAM LQYFHEAHHG LYHDVRYKHQ PEVVQKILFE
TGYLKVVQDA RGKDTSQLAP LRTIPDDVQA RCVFESVDFD NSGSLDLLEL AQIFITNGVS
TETTQKMCEE AFGKFDINND GLIDLNEFTM AFKPYWAYQF AEVYVILGDA PQLMKNVINV
PLHSTAMGCP FGAAHSIPLD FGSEVISWTD LVQSKNGKSL DRALSRVRSK LKPAVR
|
|---|
| |