Gene OSTLU_17672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17672 
Symbol 
ID5004888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp426152 
End bp427165 
Gene Length1014 bp 
Protein Length337 aa 
Translation table 
GC content65% 
IMG OID640420309 
ProductDMT family transporter: drug/metabolite 
Protein accessionXP_001420687 
Protein GI145352723 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.420453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGG AAAAAGACGC CGAACGCGGC GACGGGACGC TCGCGAGGCG GTCGAGCCTG 
AGCGAGAGCT TCAGCGAGCA CGATCGAGGG CAGATCGTGA ATCACGCGGC GCTGTGGACG
GCGCAGTTGA TTTGGGCGCT CATGCACGTG CTGAGCCACG ACGCGCTCGA GCACGTCGAG
CCGACGGCGT TCTGCGCGCT CAGGCTCGCG CTGGCGCTGC CGTTTCTGGC GATATCGGCG
AGGAAGGAGG GCGGGAGTCT GCCGTGGCGC GCGGTCGCGA CGTGGGTGGT GCCGATGGGG
GCGATGATCG GCGCGGCGTA TCTGTTGGTC TTCGTGGCGA ACGCGCGCTC GGGACCGACG
CTCGTGGCGT GCGTGCAGCC GATCATGCCG GTGTCGGTGG CGGTGATGAG TTATGTGATA
GGATTGGAGC GCATGACGCG CGTGAAGGCG CTGGGCGTGA TCGTCGTTTT CGCGGGAACG
GTCACCGCGC TGCGCGCGTA CGAAATTTTT CAAACGGGCG GGATGAATTT TTTGGACATC
TTTCTCTTGC TGTCGCAGAC GAATTCGTAC GCCGTCTACG TCGTGATGCT CGGCGTGGCG
ACGAAAACGT ACCCGTATCC ATTGCTGTTC TTATTCCTCG CCACCGCCGT GGCCGAGTTC
GTCGTCTTGC TCATCGCGAT TCCGGCGTTC GCCCGACTCG ACGTCTCCCG CGTTCCCGCG
TCCGCCTGGG GCGCCGTCGT CTTCGCGGGA TGGGGCTCGT CCGTCTTCGC CCACTCCCTG
AATTCTTGGG CCGTCGCTCG CGTCAAGGGC GTCTTGCCCA CCGTCTACTC CGGCGTCCAA
GTCATCTTCA CCATCGTTCT CAGTCGCGTG TTCCTTCGCG AGCGTCTGCC GTGGGATCGA
GGCGTCGGCA TCGCCGTCAC CATCCTCGGC GTCTGTTTAG TCGCGCGCGC CAAGTACGCC
GAGACGCCCG ACGCGACGCG TCGCGACGCG CCCTCGCGCT CGTGCGGCGC ATAG
 
Protein sequence
MATEKDAERG DGTLARRSSL SESFSEHDRG QIVNHAALWT AQLIWALMHV LSHDALEHVE 
PTAFCALRLA LALPFLAISA RKEGGSLPWR AVATWVVPMG AMIGAAYLLV FVANARSGPT
LVACVQPIMP VSVAVMSYVI GLERMTRVKA LGVIVVFAGT VTALRAYEIF QTGGMNFLDI
FLLLSQTNSY AVYVVMLGVA TKTYPYPLLF LFLATAVAEF VVLLIAIPAF ARLDVSRVPA
SAWGAVVFAG WGSSVFAHSL NSWAVARVKG VLPTVYSGVQ VIFTIVLSRV FLRERLPWDR
GVGIAVTILG VCLVARAKYA ETPDATRRDA PSRSCGA