Gene OSTLU_17563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17563 
Symbol 
ID5004618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp204267 
End bp205205 
Gene Length939 bp 
Protein Length312 aa 
Translation table 
GC content59% 
IMG OID640420039 
Productpredicted protein 
Protein accessionXP_001420781 
Protein GI145352919 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0164113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0513256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCG TGCGCGCGGT GAGCGCGACG CCGGACGTGT CGAGCGAACA AGAATTTAAC 
GCGTACATCA AGAACGTGAA CGCGGAGATC GAACGCGCGC TGGACGCGTC GGTGCCGATG
CATTATCCGG AACGCCTGAG CGAGAGCATG CGATATTCGC TGCTGGCGGG AGGGAAAAGG
ATTCGACCGG CGCTGTGCTT GGCGGCGTGC GAACTCGTGG GGGGGACGAT GGAGGTGGCG
ATGCCGACGG CGTGCGCGCT GGAGATGATT CACACCATGT CGCTGATCCA CGACGATTTG
CCGAGCATGG ATAACGACGA CTTTCGCCGC GGCAAGCCGA CGAATCACAA GGTGTACGGA
GAGGAGATGG CGATTTTGGC CGGTGACGCG CTGTTGAGTC ACGCGTTTGA GTACATCGGA
AGAGAAACGA AAGGGGTGAG CGCGGATAAA GTGCTTCGAG TGATCGTCGA CGTCGGAAAG
TGCGTCGGGA GCGAGGGGTT GGTCGGCGGA CAAGTCGTGG ATATCATGTC CGAGGGCGCG
GACGAGGGCA CGGTGACGAT TGATACCTTG AAGTACATTC ACGCACACAA GACGGGAGCG
TTGCTCGAGG TGAGCGTCAC GGCTGGTGCC ATTCTCGGGG GGGCGAGCGA AGAGCAGATC
GGGAAGCTGG AGCGATACGC GCAAAACATT GGTTTGGCGT TTCAAGTCGT CGACGACATT
CTCGACTGCA CGGCGACGAG CGAAGAGCTC GGGAAGACCG CGGGTAAGGA TATGGCCGTC
GGCAAGTCCA CCTATCCCAG TCTGGTCGGC ATGGAAGAGT CCAAGCGCAT CGCGGCGGAT
CTCATTAGTA AGGCAAAGCA AGAGTTAGAG GGCTTTGACC CGGTGAAGGT CAAGCCGCTC
ATCGGTTTGG CGGATTACAT TCAAAACAGA AAGAACTAA
 
Protein sequence
MGRVRAVSAT PDVSSEQEFN AYIKNVNAEI ERALDASVPM HYPERLSESM RYSLLAGGKR 
IRPALCLAAC ELVGGTMEVA MPTACALEMI HTMSLIHDDL PSMDNDDFRR GKPTNHKVYG
EEMAILAGDA LLSHAFEYIG RETKGVSADK VLRVIVDVGK CVGSEGLVGG QVVDIMSEGA
DEGTVTIDTL KYIHAHKTGA LLEVSVTAGA ILGGASEEQI GKLERYAQNI GLAFQVVDDI
LDCTATSEEL GKTAGKDMAV GKSTYPSLVG MEESKRIAAD LISKAKQELE GFDPVKVKPL
IGLADYIQNR KN