Gene OSTLU_17472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17472 
Symbol 
ID5004740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp7415 
End bp8425 
Gene Length1011 bp 
Protein Length336 aa 
Translation table 
GC content58% 
IMG OID640420161 
Productpredicted protein 
Protein accessionXP_001420559 
Protein GI145352453 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC GCATGAGCGT GTTGCGTGCG AGCGGCGAAT TAGGACGTCG CGAGACGCTG 
AGCGTCGTCT CGACGTCTTC GTCCGGATTC GGGAATATGG GCGGCACGAA CGTGCGAACG
ATGACTCCCG GGCTCATCGA GTTTGAGCAG TTTCTCGTCG AAAGCGGTTG GCGCGTGGAT
TCGGAGCGCA AAGCGATCTC TCGAGACGTG CGCGATACGC TCGTGAGCGA AGCGAAGAAA
AAAACGGCGC TGAAGATGAA GGTGAATGAC GCACCGATGA GCAAGACCAT GCTGAGTAAG
GTAAAAGTCG GTGACTTGCG TGACGCCGCA AAGGTTCTCG GTCTCGATCA GGTCATGCAG
GGCGTCACCA AGAAGGCGGA CGTCGTCGCG TACCTGCTCG CGTATTATGA ATACATGCAT
GGTACAATCG ACGCGAAAAC CATGGGCGTG CGCATGTCGG ACGTATCCAG CATCAGCGCG
GAGATCATGC GAGAAGCCGA AAAGGATTCG AATGCCACGT CGGCGAGCGC ACGCTCGGCA
AAAGTGTCGA AACCGGAGCT CAAGCGCGAA ACAGATCCAG GTCGTATGGA CTACGTGAAA
GCTTTCGAAC CGGATGAATT GGTACAGCTT CTTGTTCGCG CTCGCGGTAT CGACGTGATG
TCTATAAACG TTCGCGATCA GTGCACGTGG ACAGACCATC TCATTATCGC CACTGCGCGA
AGCGCGCACC ACCTGAAGGC GCTCGCCGGC GCAGTTCTTC ACGCCGTGAA AGCGCGCACC
GAGTACGTCG CCGGCGGTCG ATTGCAGCCA GTCATCGAGG GCGCCCAGAA CGGCGGGGAT
AAGGACTGGA TGGCTGTCGA CTGCGGTTCG TGCATGGTGC ACATATTCTC TCCCGAGGGT
CGAGCGCAGT ACAATCTCGA GGAACTGTGG GCGACAGGCG AAGAGATAGT ACACAATGGG
CCTGAACGCC TCTCGATCGA CACCATCGGC GCCGATCACC ACACAGCGTG A
 
Protein sequence
MAERMSVLRA SGELGRRETL SVVSTSSSGF GNMGGTNVRT MTPGLIEFEQ FLVESGWRVD 
SERKAISRDV RDTLVSEAKK KTALKMKVND APMSKTMLSK VKVGDLRDAA KVLGLDQVMQ
GVTKKADVVA YLLAYYEYMH GTIDAKTMGV RMSDVSSISA EIMREAEKDS NATSASARSA
KVSKPELKRE TDPGRMDYVK AFEPDELVQL LVRARGIDVM SINVRDQCTW TDHLIIATAR
SAHHLKALAG AVLHAVKART EYVAGGRLQP VIEGAQNGGD KDWMAVDCGS CMVHIFSPEG
RAQYNLEELW ATGEEIVHNG PERLSIDTIG ADHHTA