Gene OSTLU_88668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88668 
Symbol 
ID5004427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp512489 
End bp513298 
Gene Length810 bp 
Protein Length269 aa 
Translation table 
GC content62% 
IMG OID640419848 
ProductF-ATPase family transporter: protons (vacuolar) 
Protein accessionXP_001420531 
Protein GI145352388 
COG category[C] Energy production and conversion 
COG ID[COG1394] Archaeal/vacuolar-type H+-ATPase subunit D 
TIGRFAM ID[TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.877378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCG CGGGCGCGCG ATTGAACGTG ACGCCGACGG TGACGACGCT CGCGGTGATC 
AAATCTCGGC TCGCGGGCGC GCAGCGCGGG CATCGATTGC TGAAGAAGAA GGCGGACGCG
CTGACGCTGC GGTATCGCGG CATCCTGCGC GACATCGTCG AGGCGAAGCG TAAGCTGGCG
ACGTCGATGC GGGACGCGCA CTTCGCGTGG ACGCGGGCGA AGTACGCGGG GGGGGACGCG
GTGAAGCACG CGGTGCTGGA CGGCGTGGAC CGGGCGAACG TGCGAGTGAT GGCGCACGAG
GATAACGTGG CGGGAGTGAA GATACCGAAG TTTACGTGCA GGAAGTGCGG GGCGGACGAA
CGGAGGATGG AGCTGACGGG ATTGGCGCGG GGGGGGGCGC GCGTGCGAGA GGCGAAGGCG
TCGTACGGCG AGGCGATTGG ATTGTTGAGC GAATTAGCGA GCTTGCAGAC GGCGTTCGTG
ACGCTGGACG AGGCGATAAA GACGACGAAT CGACGGGTGA ACGCGTTGGA GAATTACGTG
ACGCCGAGAT TGCAGAACAC GGTGAAGTAC ATCTTGAGCG AGTTGGACGA ACTCGAGCGG
GAGGAGTTCT TTAGGTTGAA AAAGGTGCAG GCGAAGAAGA AGAAAGACAT CGAGGAGACG
GAGATGATGG AGGCGGAGGA AGAGAAACGG ATCACGCAAG CCGTGGATGC GGAGTTGCGG
GCGTTCGGGG ACGTCATCGG AGGTGAGGGC GGACGCGGGG CGGGAGGGAA TTTGATCGAA
AGCGAGCACG ACGAAGATTT GTTGTTTTAG
 
Protein sequence
MSSAGARLNV TPTVTTLAVI KSRLAGAQRG HRLLKKKADA LTLRYRGILR DIVEAKRKLA 
TSMRDAHFAW TRAKYAGGDA VKHAVLDGVD RANVRVMAHE DNVAGVKIPK FTCRKCGADE
RRMELTGLAR GGARVREAKA SYGEAIGLLS ELASLQTAFV TLDEAIKTTN RRVNALENYV
TPRLQNTVKY ILSELDELER EEFFRLKKVQ AKKKKDIEET EMMEAEEEKR ITQAVDAELR
AFGDVIGGEG GRGAGGNLIE SEHDEDLLF