| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_88568 |
|---|
| Symbol | |
|---|
| ID | 5004469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | - |
|---|
| Start bp | 179087 |
|---|
| End bp | 181975 |
|---|
| Gene Length | 2889 bp |
|---|
| Protein Length | 962 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640419890 |
|---|
| Product | VIC family transporter: potassium ion channel subfamily H |
|---|
| Protein accession | XP_001420439 |
|---|
| Protein GI | 145352193 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0730673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0371223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG CCGAGCGCGC GCGCGCGAAG ACGCGCGATC GCGCGACGCG CGCGACGCGC
GACGGCGATT CCGACGACGA ATTCTTCGGC GCGGGCGCAA CACCAAACGC GAGCGACGCG
CGCGACGCGA CGACGGCGAG CGCGCACGAC AGCGCGGGAA GCGACGAGGG CGCGCGCGGG
GATGGCGATG GAAAGCTCGA CGCGGCGAAC GGGACGCGAG CGATGACGCG GGCGGAGAAG
GTGAAGGATG CGATTCGAAG GGCGAAGGAG GCGGCGAAGG CGGGCATCGT CAACGTGCCG
CGGGGAAGCG CGGCGAGAGC GAAGCATGGG TTGGCGACGA GCGCGAAGGC GCTGCGCGAA
AAGGAGGAGG GCGACACGAG GCGGCGGTTA GATGAGAATA AGATGGCGAG GGCGGCGATG
ACGGCGGCGG CGTCGGAGAA GCACAAGCAA AAGATGTTTG ATACCACCCG GTTGGAAAAT
TTCTTGGATC ACGGCGACGA GTCCGAGGCC GATTGGAACG CGGCGGACAG CGATGAGGAC
GAAGATGAAG CCTCGGCGAT CGCGAAATAC GGCGATGACG ACGAGGCGAG ATCGTTATTC
GTCATGCACC CGACGACGAA GCTGCGGCAG TATTGGGATT TTCTACAAAT TTTCCTGTTG
CTGTACATCG CGATTTCCGT GCCCTATCGC ATCGGGTTCA GCGAGCCGTC GTACGGATTG
TGGTACGTCG CGGATTTTCT GGTCGATATT TATTTCTACA TTGACATGTT TTTCAACTTC
TTCACGGCGT ACTGGGAGAC GAGCGCCGAT GACGACGACT TTCACTACGT GACGAATTTG
TGGAAGATTC AAAAGCATTA CTTGAAAGGC TGGTTCATTC CGGACGCCAT ATCGCTAATC
CCCGTGGATT ACGTTTCTCG CAGCATCGAT GGCACGTTGA CGTGTTCGTG GGAGTCTGAG
GCGGCGTGTG GCGCCGCGGC TGAGAATTCA CAAGTGCCCG AGGTGCTGCG TTTGTTCAAA
ATGCTGCGCC TACTTCGCGT GATGCGCACG GGTAGAATCT TGGAACGTTA TCAAGAGAAT
CTTATGCGCG TGTATAAAAT GGTGACTCTC GGGCGCTTGC TCGCGCTTTT AGTGCTCCTT
TCTCACTGGA TGGCGTGTGC GTACGCCTAC GTGTACGACT TTCAACGCGA AGACGCGAGC
GGTGTAGAGT CGCACAAGAG TGAAATGTAC GTTGCCGCGT TGTTTTGGTC GGTGCAAACA
CTCACGACGG TAGGCTACGG TAACGTCGTT CCGACCACTG TCGATGAACG CGTCATAGCC
ATCCTCGTGA TGATCACCGG GGGCTTTGTA TTTTCCGCCA TCATCTCCGG CGTGAACATG
TCCATGGATG AAGACTCGCC CGGGAATCGC TTCGCGGTGC TCATGAACCA CGTACGCGAA
CTTTTGTCCG AGCACAAGAT GCCAAACGGA TTGAAATCGC GCGTCCGGTC GCACTACAAG
GCTTCCGCGA AACCTCAAAA ACTGGTGAAC CGAGATATCA TCCAACCGCT CCCCGAGGCG
ATTCGCGCCG ACGTCAACTT TTACATTTAC GGTAAAGCGC TGTCCATAGG TTTAAAGGCC
AATGGCACGG TGCAGCCCGA CGGGATTGTG ATAGAGATCC TCTGTCGTAC CATGGATACG
CACATGTACG CGCGAGGCGC ACGTATATGC TATCCGTACG AACTTGCGGA TAAGTTCATC
ATCACGCTCA ACGGGAGAGT TTCGTATTCC CCCGACGAGG CGTCCGGATT CCACCACTCC
CACGTACAGA AAATCAAGCG CAAGCGATTG CGAGAACAGC AAATCGAACT CGCGGAAGAA
AAAGGTTTGC TCCGCGGCCC GGGCACAGTG CTCAACCCCG GTTTACTTTC CGGGTTCTAT
AAAGGCATGT TGTGCGCCAT GCCGTTTGAC AAACACGTCG AGGCGCTCGT CATGGACCAC
GCGGTGTTTT ATGATATTTG CGCGCAACAT CAACCGACTC TATTGCGTAA CTTCGAGGAT
GAGTTTTTGC ACGCGCTACA AGCGCTGAAC AAACCAAAGA TGGCGCGCAT CGCGTTGAGC
GAGTGCGACA TGCGAAGATT TTTAGAAGAA ACAACGCGCA ACGTGTGCTC GAATTGGCGC
GAGTTGCTGC AGCAGGAACG CGCCCAAGAG GATACGAAAA GACGTGCGAG GGAGCAAGCT
GGTGCAATCG GAACGGTCAC AGCGGGTGGA TTCAAGGATA CGAATGTACC AGTCTCGGGA
GCGGCGCCCG GGGCGACGAT GGGCGCCATC AAGCTCGCGA TGCAACAAAT GCACGCCGAC
ATAGTAAATA TTTCAGAGCA AATCGCGCAA GTCATGATCG CTGTCAAGGA AGTGCAAGTT
GTTGGCCAAG ACACCGCGTC GAACGTGTCA CACATCATCA TCAGCAACGA CACGATTGAA
GAGAAACAAC TGAACATGGA GTTGAACGTG GAGGCGGTGT ACCAGTCGCT GCAACAAATC
GCCTCGAACG GTCTGAGCAT GGAGGCTGGC GGGTGGCACG GCGGCGGCGG CGGCGGCGGT
AAACAAGTAT TTGATTTTAG AAAGTCCGGC TCCCAAAGCG GCGGCGCCGG CGGCGGAAAA
GACGCCGCCC CGTTCAGCGC GTTACAATCC GACGCCATTC GCGAAAAGAT TGAACAAGCC
GCCAAACGCG GCACGAAGCT CTCCGTCACC ACCCACATCG ACAACGAAGA AGAAGTTTGG
GAACGCGAGC GTCGTCCCCC GACCGTGGGC ATCCAAGGCA TTCGTCGCGT CGACCCCGAC
AGGGCGCGAG CGCGGCAGGC CGAGAAGGAC AAGTACCGCG CCGACGGCGT CTTGCGCGAC
GCGCTCTAG
|
|---|
| Protein sequence | MAAAERARAK TRDRATRATR DGDSDDEFFG AGATPNASDA RDATTASAHD SAGSDEGARG
DGDGKLDAAN GTRAMTRAEK VKDAIRRAKE AAKAGIVNVP RGSAARAKHG LATSAKALRE
KEEGDTRRRL DENKMARAAM TAAASEKHKQ KMFDTTRLEN FLDHGDESEA DWNAADSDED
EDEASAIAKY GDDDEARSLF VMHPTTKLRQ YWDFLQIFLL LYIAISVPYR IGFSEPSYGL
WYVADFLVDI YFYIDMFFNF FTAYWETSAD DDDFHYVTNL WKIQKHYLKG WFIPDAISLI
PVDYVSRSID GTLTCSWESE AACGAAAENS QVPEVLRLFK MLRLLRVMRT GRILERYQEN
LMRVYKMVTL GRLLALLVLL SHWMACAYAY VYDFQREDAS GVESHKSEMY VAALFWSVQT
LTTVGYGNVV PTTVDERVIA ILVMITGGFV FSAIISGVNM SMDEDSPGNR FAVLMNHVRE
LLSEHKMPNG LKSRVRSHYK ASAKPQKLVN RDIIQPLPEA IRADVNFYIY GKALSIGLKA
NGTVQPDGIV IEILCRTMDT HMYARGARIC YPYELADKFI ITLNGRVSYS PDEASGFHHS
HVQKIKRKRL REQQIELAEE KGLLRGPGTV LNPGLLSGFY KGMLCAMPFD KHVEALVMDH
AVFYDICAQH QPTLLRNFED EFLHALQALN KPKMARIALS ECDMRRFLEE TTRNVCSNWR
ELLQQERAQE DTKRRAREQA GAIGTVTAGG FKDTNVPVSG AAPGATMGAI KLAMQQMHAD
IVNISEQIAQ VMIAVKEVQV VGQDTASNVS HIIISNDTIE EKQLNMELNV EAVYQSLQQI
ASNGLSMEAG GWHGGGGGGG KQVFDFRKSG SQSGGAGGGK DAAPFSALQS DAIREKIEQA
AKRGTKLSVT THIDNEEEVW ERERRPPTVG IQGIRRVDPD RARARQAEKD KYRADGVLRD
AL
|
|---|
| |