Gene OSTLU_88539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88539 
Symbol 
ID5004283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp80367 
End bp80582 
Gene Length216 bp 
Protein Length71 aa 
Translation table 
GC content59% 
IMG OID640419704 
Productpredicted protein 
Protein accessionXP_001420409 
Protein GI145352128 
COG category[K] Transcription 
COG ID[COG1644] DNA-directed RNA polymerase, subunit N (RpoN/RPB10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.181731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTC CCGTGCGATG CTTCACGTGC GGGAAGGTGA TCGGGAACAA GTGGGACACG 
TACCTCGACC TGCTGCAGGC GGACTACAGC GAGCGCGACG CGCTGGACGC GCTCGGGCTG
AATCGGTACT GCTGTCGACG AATGGTGATG TGTCACGTCG ATCTGATCGA GAAATTGCTG
AGGTATAACA CGCTCGAGCG CGTGGACGAC GCGTGA
 
Protein sequence
MIIPVRCFTC GKVIGNKWDT YLDLLQADYS ERDALDALGL NRYCCRRMVM CHVDLIEKLL 
RYNTLERVDD A