Gene OSTLU_5433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_5433 
Symbol 
ID5004295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp3013 
End bp3960 
Gene Length948 bp 
Protein Length316 aa 
Translation table 
GC content51% 
IMG OID640419716 
Productpredicted protein 
Protein accessionXP_001420231 
Protein GI145351758 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5077] Ubiquitin carboxyl-terminal hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GGCGCGGGGC TGGCCAACCT CGGAAACACG TGCTTTCTGA ATTCGGTCCT CCAGTGCTTA 
ACACATACAC CGGCGTTGGC GAACTTCGCG CTGCGCGGAG AGCACAAGAA ATATAAAACG
GGCGGTTCAT TCAACGCTTT GTATGAAATC GGTGAGCACG TGGCTCGGGC GTTGAACTCG
AGTGGGAGAA CGATTGCGCC GACGGCGTTG GTGAAGAATT TAAGAGCGCT TTCAAAGACC
TTTCGTAAAG GTCGACAGGA AGATGCTCAC GAGTTGGCGC GTTGTTTGTT AGATGCGATG
CATAAGAAGT GTGTCGAAGT AGTTAAGCCA AAGATATCGC CGAATTCGGC GCGTGCGGAG
ACGAGCTTTG TTTGGAAGGT TTTTGGAGGT CGGCTGCGCT CACAGGTGAA TTGTAAGACG
TGCGGTCGCA ACTCGGAGAC GTTCGATCCA TTTCTTGACT TATCCTTGGA AGTTGGCCGG
GCGAAAAGTG TATTAGGTGC TTTCAAGATG TTCACGCACA CTGAAGTGCT CGACGGTGAC
AACAAGTATA GGTGCGAAGG CAAAAGCGCG AATTCAAAGA GTCACTTGAC GAAGGCTTCG
AAGCAGTTCA CGGTGAATCA GGCACCAAAC GTGCTCGCGT TACAGTTGAA GAGGTTTGCA
TACGTGCCTT TCGGGAGAGG AAAGCTGAAT CATTTCGTTG AGTACCCTCT GGAGCTCGAT
ATCACGCCAT ACACTTCAGA CGAAGGTCTT ACGTCGAGAG GAAAGGCAGT TTACGATTTG
TACGGCGTGC TCGTGCACGC GGGTAACAGC TCAAATAGCG GTCATTATTA CTGTTTTGTC
AAGGTGGCAA CGGGAACTTG GTGCTTGATG GATGACGATG AAATTACCTC AGTGAGTGAA
AAAGTGGTGC TCAAGCAGCA AGCGTATTTA CTCTTTTATG CTCGCCGC
 
Protein sequence
GAGLANLGNT CFLNSVLQCL THTPALANFA LRGEHKKYKT GGSFNALYEI GEHVARALNS 
SGRTIAPTAL VKNLRALSKT FRKGRQEDAH ELARCLLDAM HKKCVEVVKP KISPNSARAE
TSFVWKVFGG RLRSQVNCKT CGRNSETFDP FLDLSLEVGR AKSVLGAFKM FTHTEVLDGD
NKYRCEGKSA NSKSHLTKAS KQFTVNQAPN VLALQLKRFA YVPFGRGKLN HFVEYPLELD
ITPYTSDEGL TSRGKAVYDL YGVLVHAGNS SNSGHYYCFV KVATGTWCLM DDDEITSVSE
KVVLKQQAYL LFYARR