| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_50795 |
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| Symbol | |
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| ID | 5004280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009365 |
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| Strand | - |
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| Start bp | 52705 |
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| End bp | 59716 |
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| Gene Length | 7012 bp |
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| Protein Length | 2320 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640419701 |
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| Product | predicted protein |
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| Protein accession | XP_001420401 |
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| Protein GI | 145352111 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5178] U5 snRNP spliceosome subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0224006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCG GTGTGTCGGA GGAAGTGATG GAGAAGGCGC GGAAGTGGCG AGCGCTGAAC
GCGAAGCGGT ACGGCGCGCG GCGCAAGTTT GGGTACCAGG AACCGCCGAA GGAGGAGATG
CCGCCGGAGC ACGTGCGGAA GATTATCAAG GATCACGGCG ACATGTCGAG CCGAAAGTTT
CGACACGATA AGAGGGTGTA CTTGGGAGCG TTGAAATTCG TGCCGCACGC GGTGTATAAA
CTGTTGGAGA ACATGCCGAT GCCGTGGGAA CAGGTGCGGC ACTGCGAGGT GATTTACCAC
ATCACGGGGG CGATTACGTT TGTGAACGAG ACGCCGAGGG TGATCGAGCC GGTGTTCATC
GCGCAGTGGG GGACGATGTG GATCATGATG CGACGGGAGA AGAGGGATAG GAAACATTTT
AAGCGCATGC GGTTTCCACC GTTTGACGAC GAAGAACCGC CGTTGGATTA CGCCGACAAC
TTGCTCGACG TGGACCCGCT GGAGGCGATC GCGCTGGAGT TAGACGAAGA GGAAGACGGC
GCGGTGGCGG AGTGGTTCTA CGATCATAAC CCGCTGAAGT GGACGAAATT CGTCAACGGA
CCGAGTTACC GCAAGTGGCA GTTGCCGCTA CCGGTGATGG CGAACCTGCA CAGACTGTCG
TCGCAGCTCC TGAGCGACTT GACGGATAAA AATTACTTTT ACCTCTTTGA TCACAAATCT
TTCTTCACCG CCAAGGCTTT GGGCATGTGC ATCCCGGGTG GACCAAAGTT TGAGCCGTTA
TTTCGAGACA TGGATCGCGC GGACGAGGAT TGGAATGAGT TCAACGACAT CAACAAGCTC
ATCATTCGCA GCGCGCTGCG CACCGAGTAC AAGGTGGCGT TTCCGTACTT GTACAACAAC
CGGCCGCGCA AAGTGTCGCT CGCGGTGTAT CACACGCCCA TGGTGATGTT CATCAAGACG
GAAGATCCCG ATTTACCGGC GTATTACTAC GACCCATTGA TTCATCCGAT TGCGTTTTAT
AGGTCAAACA AGCAGAAGAC GACGCCGCGA GAAGAAGACG ACGGCGAGGA CGACTTTCAG
TTGCCGGATG GTATCGAGCC GTTTTTAGAA GACACCCCGC TTTACACGGA CAACACTGCG
GGTGGGATCG CACTTCTCTA TGCACCTCGA CCGTTCAACC TGAGGAGCGG GAAGACGCGT
CGCGCGATGG ACGTGCCCTT GGTGAACAAC TGGTTTCACG AGCACTGCCC GTCGGGCTAC
CCGGTCAAGG TTCGCGTGTC GTATCAAAAG CTGTTGAAAG GTTTCGTGTT GAACCAATTG
CATAAGCGCC CGCCGAAGCC GATGAAGCGC CGAAACTTGT TCGTCGCGCT GAAGAAGACG
AAATTCTTCC AGTGCACCGA GCTCGACTGG GTCGAAGTCG GTTTGCAAGT GTGTAGGCAA
GGTTACAACA TGCTCAATCT CTTGATTCAT CGAAAGAACT TGAACTACTT GCACTTGGAC
TACAACTTCA ACTTGAAGCC CGTGAAAACG CTGACGACAA AGGAGCGTAA GAAGAGTCGA
TTTGGGAACG CGTTCCACCT CTGCCGCGAA GTCTTGCGTC TCACCAAGCT CGTGGTGGAT
TCCAACGTGC AGTTCCGTCT CGGTAACATC GACGCGTATC AACTCGCCGA TGGATTGCAA
TACGTGTTCT CGCACGTCGG TCAATTGACT GGGATGTACA GATACAAATA CAAGCTCATG
CGTCAGATTA GAATGTGCAA GGATCTCAAG CACCTGATTT ACTATCGTTT CAATACGGGT
CCGGTGGGTA AAGGGCCGGG CGTGGGCTTC TGGGCCCCCA TGTGGCGCGT GTGGCTCTTC
TTCTTGCGCG GCATTGTGCC TTTACTCGAA CGATGGCTCG GCAACTTGCT CGCGCGTCAA
TTTGAAGGTC GTAACAACAA GGGCATCGCC AAGACTGTGA CGAAGCAACG CATCGAGTCG
CACTTTGATC TTGAATTACG CGCAGCCGTG ATGCACGACA TCTTAGATTC CATGCCAGAG
GGCGTCAAGC AAAACAAAGC TCGCACGATT CTCGCGCATC TTTCAGAGGC GTGGAGATGC
TTCAAGGCGA ACATCCCGTG GAAGGTTCCG GGCATGCCGA CACCTATAGA AAACATGATC
TTGAGATACG TCAAGAGCAA AGCTGATTGG TGGACCAACG TCGCGCACTA CAACCGCGAG
CGCATTCGCC GCGGCGCGAC AGTGGACAAG ACGGTGTGCC GCAAGAATCT CGGCCGTTTG
ACGCGTTTAT ACTTGAAAGC GGAACAAGAG CGACAGCACA ACTACCTGAA AGACGGTCCT
TACGTCACTC CAGAAGAAGC AGTCGCCATT TACACCACCA CGGTGCACTG GCTTGAATCT
CGCAGATTCT CGCCGATTCC TTTCCCGCCG TTGTCGTACA AGCACGATCG CAAGCTGCTC
ATCTTGGCGC TCGAGCGTTT GAAAGAGAAC TACTCAGTGA ACGCTCGCTT GAATCAAAAT
CAGCGTGAAG AGCTCGGCTT AATTGAGCAA GCCTTCGACA ACCCGCACGA GGCGCTCAGC
CGAATCAAGC GTCACTTGCT AACTCAACGC GCGTTCAAGG AGGTGAACAT CGAGTTCATG
GATTTGTACT CTCACTTGAT ACCGGTGTAC GAAATCGAAC CTTTGGAAAA GATTTCTGAC
GCGTATCTCG ATCAGTACAT CTGGTACGAA GCGGACAAAC GCCAACTGTT CCCCAACTGG
ATCAAGCCTT CAGACACCGA GCCGGCGCCG CTCTTGGTGT ACAAGTGGTG CCAAGGCATC
AACAACTTGA CGGATGTTTG GGACACGAAC GAGGGCGAAT GTGTGGTAAT GTTGCAAACG
CGCTTCGAGA AAATGTTTGA AAAGGTTGAC CTCACCCTGC TCAACCGTTT GATGCGTTTG
ATTGTCGATC ACAACATCGC TGATTATTGC ACGGCAAAGA ACAACGTGGT GATTTCATAC
AAGGACATGA GTCACACGAA CAGCTACGGT ATGATCCGTG GCTTGCAATT CGCATCGTTC
ATGACGCAGT ACTACGGTTT AGTTTTAGAT TTGTTGCTGC TCGGCTTAAC TCGCGCCTCA
GAGATTGCTG GTCCGGCGAA CATGCCGAAT GAATTCATTT CATATCGAGA CGTGGAGACA
GAGACGCGAC ACCCGATTCG TTTGTACTCT CGTTACATCG ATCGAGTGCA CGTTCTGTTC
AGATTCACCG CTGATGAGTC AAAAGACTTG ATTCAGCGTT ATCTCACCGA GCATCCCGAT
CCAAACAACG AAAACATGGT TGGTTACAAC AACAAGAAGT GCTGGCCTCG CGATGCGCGC
ATGCGCTTGA TGAAGCACGA CGTCAACTTG GGTCGCGCAG TATTCTGGGA TATCAAAAAC
CGTCTTCCGC GCTCGTTAAC GACGTTGGAA TGGGATAATG GTTTCGTCAG CGTGTACTCT
CGCGACAACC CCAACTTGCT CTTTGCCATG AGCGGCTTTG AAGTGCGTAT TTTGCCAAAG
ATTCGCATGG CGACTGAGTA CTTTGCCAAC AAGGACGGCG TCTGGAACTT GCACAACGAG
CAAACCAAGG AGCGAACGGC GCAGGCATTC TTGCGTGTCG ATGATGAAGC GCTTAAGTCA
TTCGAAAACC GTATCCGGCA AGTGCTCATG TCATCCGGTG CGACGACGTT TTCCAAGATT
GTCAACAAGT GGAACACGGC ACTCATCGGC TTGATGACGT ACTACCGAGA GGCAACAATT
CACACCTCGG AGTTGCTTGA TTTGTTGGTG AAGTGTGAGA ATAAGATTCA GACTCGCGTG
AAAATTGGTT TGAATTCGAA GATGCCGAGC CGTTTCCCGC CGTGCGTGTT CGCCGCACCG
AAAGAAATCG GTGGTTTGGG TATGCTCTCG ATGGGTCACA TTCTCATCCC CCAGAGCGAC
TTGCGGTACA GCGTGCAGAC CGACTCTGGC ATCACGCACT TCCGCTCGGG AATGACGCAC
GAAGAAGATC AACTCATTCC GAACCTGTTC CGCTACATCC AACCTTGGGA GGCTGAATTT
AACGATTCCC AACGCGTGTG GGCTGAGTAC GCGTTGAAGC GTCAAGAAGC GCAGGCGCAG
AATCGTCGTC TCACATTGGA GGACTTGGAA GACTCGTGGG ATCGCGGTAT TCCGCGCATC
AACACCTTGT TCCAAAAGGA TCGACACACG CTCGCGTACG ATAAGGGTTG GCGCGTGCGA
TTGACTTTCA AAGAGTACAA TCTCACCAGA CAAAATCCGT TCTGGTGGAC GCATCAGCGA
CACGACGGCA AACTCTGGAA CTTGAACAAC TACCGCACCG ACGTCATTCA GGCGCTCGGT
GGCGTCGAGG GTATCCTCGA GCACACGCTC TTCAAGGGAA CGTACTTTCC CACTTGGGAA
GGTTTGTTCT GGGAGAAAGC AAGTGGATTC GAGCAATCGA TGCAGTACAA GAAATTGACG
AACGCGCAGC GCAGTGGCTT AAACCAAATT CCGAATCGTC GATTCACGCT CTGGTGGTCG
CCTACGATCA ACCGCGCTAA TGTCTACGTC GGATTCCAAG TCCAACTTGA CTTGACAGGC
ATCTTCATGC ACGGTAAAAT TCCTACGCTG AAGATTTCGT TGATTCAAAT CTTCCGAGCG
CACTTGTGGC AAAAGATCCA CGAGTCCGTC GTCATGGATA TGTGCAACGT TTTCGACCAA
GAACTCGACG CGCTAGAGAT TGAAACGGTT CAAAAGGAAA CGATTCACCC GAGAAAGTCG
TACAAGATGA ACAGCTCTTG CGCCGACATT TTGCTCTTCG CCGCGTACAA GTGGTCGATT
TGCAAGCCGT CGCTCATGGG CGAGACAAAC GATTCTTTCG ATCAAAAGAG TTCGAACAAG
TTCTGGGTCG ACGTGCAGCT TCGCTGGGGT GACTTTGATT CTCATGACAT TGAGCGTTAC
ACGCGCGCAA AGTTTTTGGA TTACACCACG GACAACATGT CCATTTACCC GTCGCCGACT
GGGGTGATGA TAGGCATCGA CTTGGCGTAC AACTTGCACT CAGCCTACGG TAACTGGTTC
CCTGGGTGCA AACCTTTGGT GCAACAAGCG ATGGCGAAGA TCATGAAAGC TAACCCGGCG
CTTTACGTAT TGCGCGAGCG CATTCGTAAG GGTTTGCAGT TGTACTCCTC TGAGCCCACC
GAACCGTATC TCAACTCTCA AAACTACGGC GAGTTGTTCA GCAACCAAAC AATTTGGTTC
GTGGACGATA CGAATGTGTA CCGCGTGACG ATTCACAAAA CGTTCGAGGG TAACTTGGTG
ACAAAACCAA TCAACGGTGC TATTTTCATC TTCAACCCGC GCACTGGTCA ACTCTTTTTG
AAGATCATTC ACACGAGCGT GTGGGCTGGG CAGAAGCGTC TCGCGCAGTT GGCCAAGTGG
AAGACAGCAG AAGAAGTCGC GGCCTTGATT CGCTCTCTCC CGATCGAAGA GCAACCCAAA
CAAATCATCG TGACGAGAAA GGGTATGCTC GACCCGTTGG AGACGCACAT GCTCGATTAC
CCGAACATCG TCATCAAGGG AAGCGAGTTG CAACTGCCGT TCCAAGCGTG CATGAAGATC
GAAAAGTTTG GCGATCTCAT CTTGAAAGCC ACTGAGCCGC AAATGGTGTT GTTCAACATC
TACGACGATT GGTTGAAGAC AATTTCGAGT TACACAGCCT TTAGTCGTTT GATTTTGATT
TTACGAGCGT TGCACGTCAA CAACGAAAAG GCAAAGATGA TGTTGCGTCC TGACAAGAGT
GTCGTGACGC TACCGCATCA CGTGTGGCCA GATCTCACCG ATGAGCAATG GATCAAGGTT
GAAATCGCTT TGAAAGACTT GATCTTGGCG GATTATTCTG CGAAGAACAA CGTCAACGTC
TCGGCGTTGA CGCAAAGCGA GGTTCGCGAC ATCATTCTTG GCGCTGAAAT CACGCCGCCG
TCTGTGCAGC GACAAGAGAT TGCCGAAATC GAAAAACGTG GGCAAGATGC CAACCAGCAG
ATTGCCGTCA CGACCAAGAC TACGAATGTG CACGGAGACG AGCTCATCGT CACCACTACG
AGTCCGTACG AACAATCAAC GTTCGGTAGT AAGACCGATT GGCGTATTCG AGCCATCAGC
GCGACAAATT TACATTTGCG CGTGAACCAC ATTTACGTCA ACAGCGACGA CTTGAAGGAG
ACTGGATACA CATACATCAT GCCCAAGAAC GTGTTGAAAA AGTTCATCAC TATCGCCGAT
TTGCGTACGC AGATTGCGGG TTACATGTAC GGCGTTTCGC CGCCGGACAA CCCTCAAGTG
AAGGAGATCC GTTGCGTCGT GATGCCGCCT CAGTGGGGCA ACCACAGCTC GGTGAATTTA
CCGTCGACGC TCCCGGAGCA CGACTACTTG AGCGATCTCG AGCCGTTGGG GTGGATTCAC
ACGCAACCGA ACGAGAGCTC TCAATTGCAA CCGCAGGATT GCACGCAGCA CGCCAAGATT
CTCGAGCAAA ATTCGTCCTG GGATGGAGAA AAGAGCATCA TCTTGACGTG CTCGTTCACC
CCGGGTTCGT GCTCGTTGAC GGCGTACAAG ATCACGCCCG CAGGGTACGA ATGGGGCCGC
GCGAACAAGG ACATGACGAG CACAAATCCG CAAGGATATG GACCCGGACA TTTCGAAAAG
GTTCAAATGT TACTCTCCGA TCGTTTCTTG GGTTACTACA TGGTTCCCGA CGGCGGGTCG
TGGAACTATT CTTTCCAAGG CGTCAAGCAC TCGGCGGGCA TGAAGTACGC ACTCAAGCTC
GGGAATCCGC TCGAATTTTA CCACGAGCGA CACAGACCGA CGCACTTCCT CGAGTTCGCC
GCGCTCGAGG CGGAGAAACC GGAAGAAACG GCACCGATGG ATCGGGAAGA CGTCTTTTCT
TGATCGAGAC TTACAAGACC GTCCGACGAC GAAAGATTTG TAAAACAATA AT
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| Protein sequence | MDVGVSEEVM EKARKWRALN AKRYGARRKF GYQEPPKEEM PPEHVRKIIK DHGDMSSRKF
RHDKRVYLGA LKFVPHAVYK LLENMPMPWE QVRHCEVIYH ITGAITFVNE TPRVIEPVFI
AQWGTMWIMM RREKRDRKHF KRMRFPPFDD EEPPLDYADN LLDVDPLEAI ALELDEEEDG
AVAEWFYDHN PLKWTKFVNG PSYRKWQLPL PVMANLHRLS SQLLSDLTDK NYFYLFDHKS
FFTAKALGMC IPGGPKFEPL FRDMDRADED WNEFNDINKL IIRSALRTEY KVAFPYLYNN
RPRKVSLAVY HTPMVMFIKT EDPDLPAYYY DPLIHPIAFY RSNKQKTTPR EEDDGEDDFQ
LPDGIEPFLE DTPLYTDNTA GGIALLYAPR PFNLRSGKTR RAMDVPLVNN WFHEHCPSGY
PVKVRVSYQK LLKGFVLNQL HKRPPKPMKR RNLFVALKKT KFFQCTELDW VEVGLQVCRQ
GYNMLNLLIH RKNLNYLHLD YNFNLKPVKT LTTKERKKSR FGNAFHLCRE VLRLTKLVVD
SNVQFRLGNI DAYQLADGLQ YVFSHVGQLT GMYRYKYKLM RQIRMCKDLK HLIYYRFNTG
PVGKGPGVGF WAPMWRVWLF FLRGIVPLLE RWLGNLLARQ FEGRNNKGIA KTVTKQRIES
HFDLELRAAV MHDILDSMPE GVKQNKARTI LAHLSEAWRC FKANIPWKVP GMPTPIENMI
LRYVKSKADW WTNVAHYNRE RIRRGATVDK TVCRKNLGRL TRLYLKAEQE RQHNYLKDGP
YVTPEEAVAI YTTTVHWLES RRFSPIPFPP LSYKHDRKLL ILALERLKEN YSVNARLNQN
QREELGLIEQ AFDNPHEALS RIKRHLLTQR AFKEVNIEFM DLYSHLIPVY EIEPLEKISD
AYLDQYIWYE ADKRQLFPNW IKPSDTEPAP LLVYKWCQGI NNLTDVWDTN EGECVVMLQT
RFEKMFEKVD LTLLNRLMRL IVDHNIADYC TAKNNVVISY KDMSHTNSYG MIRGLQFASF
MTQYYGLVLD LLLLGLTRAS EIAGPANMPN EFISYRDVET ETRHPIRLYS RYIDRVHVLF
RFTADESKDL IQRYLTEHPD PNNENMVGYN NKKCWPRDAR MRLMKHDVNL GRAVFWDIKN
RLPRSLTTLE WDNGFVSVYS RDNPNLLFAM SGFEVRILPK IRMATEYFAN KDGVWNLHNE
QTKERTAQAF LRVDDEALKS FENRIRQVLM SSGATTFSKI VNKWNTALIG LMTYYREATI
HTSELLDLLV KCENKIQTRV KIGLNSKMPS RFPPCVFAAP KEIGGLGMLS MGHILIPQSD
LRYSVQTDSG ITHFRSGMTH EEDQLIPNLF RYIQPWEAEF NDSQRVWAEY ALKRQEAQAQ
NRRLTLEDLE DSWDRGIPRI NTLFQKDRHT LAYDKGWRVR LTFKEYNLTR QNPFWWTHQR
HDGKLWNLNN YRTDVIQALG GVEGILEHTL FKGTYFPTWE GLFWEKASGF EQSMQYKKLT
NAQRSGLNQI PNRRFTLWWS PTINRANVYV GFQVQLDLTG IFMHGKIPTL KISLIQIFRA
HLWQKIHESV VMDMCNVFDQ ELDALEIETV QKETIHPRKS YKMNSSCADI LLFAAYKWSI
CKPSLMGETN DSFDQKSSNK FWVDVQLRWG DFDSHDIERY TRAKFLDYTT DNMSIYPSPT
GVMIGIDLAY NLHSAYGNWF PGCKPLVQQA MAKIMKANPA LYVLRERIRK GLQLYSSEPT
EPYLNSQNYG ELFSNQTIWF VDDTNVYRVT IHKTFEGNLV TKPINGAIFI FNPRTGQLFL
KIIHTSVWAG QKRLAQLAKW KTAEEVAALI RSLPIEEQPK QIIVTRKGML DPLETHMLDY
PNIVIKGSEL QLPFQACMKI EKFGDLILKA TEPQMVLFNI YDDWLKTISS YTAFSRLILI
LRALHVNNEK AKMMLRPDKS VVTLPHHVWP DLTDEQWIKV EIALKDLILA DYSAKNNVNV
SALTQSEVRD IILGAEITPP SVQRQEIAEI EKRGQDANQQ IAVTTKTTNV HGDELIVTTT
SPYEQSTFGS KTDWRIRAIS ATNLHLRVNH IYVNSDDLKE TGYTYIMPKN VLKKFITIAD
LRTQIAGYMY GVSPPDNPQV KEIRCVVMPP QWGNHSSVNL PSTLPEHDYL SDLEPLGWIH
TQPNESSQLQ PQDCTQHAKI LEQNSSWDGE KSIILTCSFT PGSCSLTAYK ITPAGYEWGR
ANKDMTSTNP QGYGPGHFEK VQMLLSDRFL GYYMVPDGGS WNYSFQGVKH SAGMKYALKL
GNPLEFYHER HRPTHFLEFA ALEAEKPEET APMDREDVFS
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