| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_44356 |
|---|
| Symbol | |
|---|
| ID | 5004551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | - |
|---|
| Start bp | 318264 |
|---|
| End bp | 319094 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | |
|---|
| GC content | 65% |
|---|
| IMG OID | 640419972 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420475 |
|---|
| Protein GI | 145352271 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5413] Uncharacterized integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.140058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00870525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGCG CGCGAGGCAT CGAGGACGTC ATCGCGACGC GTTCGGCGCC GACGACGGGC
CGACGAGGGC GCGCGAGGGC GCGCGCGACG GTGCGAACGC GCGCGAGGTT CGATATTCTG
AAACCGCTTC GCGCGGGACC GCGGTTCGCG GCGGAACAGT CGGTGGATCC GCGCGTGTAC
CGCGGCGCCT ACGCAGACTG GACGGTGGAC GCCGCGGACC GCGCGGAGGT GTTCGCGTAT
CGAGGGTCGT TGAGCGCGAT GTCGCTCGGC GCCGCGCTCA CCGCGGGGTT GTGTCACGCC
GGGGATTACG TGGACGCGGA AAAAGCGTAC TTCTTGGGCG GATTGGGGCT GGGGGGGGCG
CTGCTGATGG TGCACATGTA CGTCGGCGAG ATTCGCGCGG CGATGCGCGC GCTCTGGTCG
GTGGGGTTTT TGGGAAGCGC GGCGATCGCG ATGAGCGCGC AGGAGCCGCT GCCGGTGTAC
GTCTGGGAAC ATCCGATGAG CGTTTTGCTC GTCGGTCCGA TGTTCGCCGC GTTGACAGGG
CTGGCGTTTA AGGAGGGGAT GTGTTACGGT AAGCCGGAGG CGGCGCTTTT ATTCTTCGCC
GTGCCGGCGA TGTGTTTGAG TCATCTTTTC GGCGCGAGCG CAGACGTGTG CGGGGTGGAG
GCGAACGTCG TGCTCGCACT TCTAGTCGTT CTTGCGTTGC GCAAGTATTC GCAGCCGATC
AAGGACGATA TCGGGGATAA ATCAATCTTC ATGTTTCAAG CGCTCGAGGA GGGGTCCGAC
GAACAACTCG AGTTTCTCAA ACGCGCGCGC GAAAACGGTT TCGACGTGTG A
|
|---|
| Protein sequence | MVGARGIEDV IATRSAPTTG RRGRARARAT VRTRARFDIL KPLRAGPRFA AEQSVDPRVY
RGAYADWTVD AADRAEVFAY RGSLSAMSLG AALTAGLCHA GDYVDAEKAY FLGGLGLGGA
LLMVHMYVGE IRAAMRALWS VGFLGSAAIA MSAQEPLPVY VWEHPMSVLL VGPMFAALTG
LAFKEGMCYG KPEAALLFFA VPAMCLSHLF GASADVCGVE ANVVLALLVV LALRKYSQPI
KDDIGDKSIF MFQALEEGSD EQLEFLKRAR ENGFDV
|
|---|
| |