| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_44133 |
|---|
| Symbol | |
|---|
| ID | 5004285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | - |
|---|
| Start bp | 88249 |
|---|
| End bp | 89550 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640419706 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420410 |
|---|
| Protein GI | 145352130 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5243] HRD ubiquitin ligase complex, ER membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATTT GGGTGCGAAA CGCGCTCAAC GAAGACGAGC GCGAGGGGAT GATTTCATCG
ATGCGACACG CCACGCAAAA CACGAGGTTC GCGCAGTGGA TGAACACGTG GTACAGCGGA
AAGGTGGAAG ACTTACAGAC GATCGGAGAC GATTGGGTGA AGTCTACGGC GATGGACGAC
GACGACGCGT CCGCGACGAC GACGAAGACG AACGCCGCCG ATACCGCCGC GGTTTCGTCC
CAAGACGGCA TGCGACAGGT ACACGCGTAC CTCAGCCGTC GATCTGGCGA TGTGGATAAG
GAAACATTCA AGCCCGGTTG GGAAGATATT TTTCGCATGA ATCAGATCCA GCTCGAAGAC
GCCGTGCGCA CGGTGAATCG CGACGACACG CTCGCGCCGA CGAAGAAGGC ATACTTGATT
CAAAACTTGC TCGCGTCGCG ATGGATCGTG GGAAATCAAT TGCAAGCGCA AAAAGATAAG
ACGACGGAGC TGTCAAGCGT GGGTAGCGCA CAAAAATCGG GTGCGCCTGC GATTCTGTGC
CAGCCCGTCG ACGAAGACGA GGAGAACGGC AAAGACGGTT GCAAGCATTA CAAGCGTCGG
TGCAAAATCG TCGCGCCGTG CTGCGACCAA GCTTTCACGT GCAGATTTTG TCACGACGAC
GCGAGTGATC ACACCGTGAA TCGCTACGCG GTGAAAGAAA TGGTGTGTAA CGAGTGCAAG
AAGCGTCAAC CCGTGAACGA GGTATGCGTG GGGTGCTCGA CGTCGATGGC AAAGTATCAC
TGCAACGTGT GCAACTTGTT TGACGACTCG AGCGAAGCCA TCTATCATTG CCCGTTTTGC
AACGTCTGTC GACGCGGTAA AGGTCTGGGC GTTGACTTCT TCCATTGCAT GAAGTGTAAC
GCGTGCGTGA GCTTACAGCA CGGCAAGCAT GAGTGCTCAG AACGAGGCAT GGATAGCGAA
TGTCCAGTGT GCAAAGAATT TCTTGCCGAG TCGGAGACAC CGGTTAAGGA GCTTCCGTGC
GGGCATATCA TGCACGCCAC GTGCTTTACC ACGTATACGC GGCACTACTA CACGTGTCCT
TTGTGTCGGA AATCGCTCGG CGACTTTTCC ATGTACTTTA GAATGCTCGA CGCCATCCTA
GCGGATGAGA GCGACGACAG CGTTCCAGAG GCGCTGCGGG GAAAGACGCA AAAGGTGTCG
TGCAACGACT GTGCGAAGGA TTCGGATGCA AAGTTTCATT TTGTATACCA CGCGTGCGCG
CACTGTAGAA GCTATAATAC GCGCGTGCTC ACGTTTGATT AG
|
|---|
| Protein sequence | MLIWVRNALN EDEREGMISS MRHATQNTRF AQWMNTWYSG KTNAADTAAV SSQDGMRQVH
AYLSRRSGDV DKETFKPGWE DIFRMNQIQL EDAVRTVNRD DTLAPTKKAY LIQNLLASRW
IVGNQLQAQK DKTTELSSVG SAQKSGAPAI LCQPVDEDEE NGKDGCKHYK RRCKIVAPCC
DQAFTCRFCH DDASDHTVNR YAVKEMVCNE CKKRQPVNEV CVGCSTSMAK YHCNVCNLFD
DSSEAIYHCP FCNVCRRGKG LGVDFFHCMK CNACVSLQHG KHECSERGMD SECPVCKEFL
AESETPVKEL PCGHIMHATC FTTYTRHYYT CPLCRKSLGD FSMYFRMLDA ILADESDDSV
PEALRGKTQK VSCNDCAKDS DAKFHFVYHA CAHCRSYNTR VLTFD
|
|---|
| |