| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_44124 |
|---|
| Symbol | |
|---|
| ID | 5004552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | + |
|---|
| Start bp | 320396 |
|---|
| End bp | 322138 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640419973 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420308 |
|---|
| Protein GI | 145351921 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2376] Dihydroxyacetone kinase |
|---|
| TIGRFAM ID | [TIGR02361] dihydroxyacetone kinase, ATP-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.136016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00988345 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAA AGTTCTTGAA CGCCCCCGAC GACGTCGTGA GCGAAATGCT CGACGGCGTG
TGCCTCGCCA CGCCCTCGAT CGCGCGCATC GCCGATCAGA ACGTGCTCGT GCACGTTCGC
GAGGGCGAGG ACAAGGTGGT TGTGATTTCA GGCGGCGGAA GCGGCCACGA ACCAGCCATG
GCGGGGTATC TCGGTCGAGG CATGCTCGAC GCCGCGGTGT GTGGGAACGT CTACGCCAGC
CCGAGCGTGG AGGCGGTGCT GAGCGCGATT CGCGCGACGA CGACCGACGC GGGGGCGGCG
CTCGTGGTGA TGAACTACAC CGGGGACAGA TTAAACTTTG GATTGGCCGC CGAACGCGCG
AAACTCGAAG GTTTCGACGT GGAGATGGTG ATCGTGAATG ACGATTGCGC GCTGGCGAGC
GATCGAGTCG GGATCGCCGG CAGGCGCGGG CTTGCGGGGA CGCTCTTCGC GCATAAAGTC
GCCGGCGCGG CGGCGGACGC CGGTAAGTCT CTGAAGGAAG TGTGCGCGGA AGCGAGGGCG
TGCGTCGAGG CCACGGGGAC GATGGGGGTA GCGTTACAAG CGTGCACGCT TCCGGGATCG
TCTGGCGTCG CGAGAGAGAT TGCGGAAGGG ACGATGGAGC TCGGACTCGG GATTCACGGC
GAACCGGGAG CGCACACGGC TAAGACGACG AGCGCCGATG AAGTCGTAGA GACGCTCATG
ACGAGTATTT TCGCGCAGAA TGAAAAGATT GGGAAACTGA GCGAAGGTTC AAACGTAGCG
CTCATGGTGA ACTCGCTCGG GGCGACACCG TTGATGGAGT TGTACGTCGC CGCCCGCGCC
GCGTTCTCGT GGCTTGCGGG CGTGAAGAAA ATAAACGTCA CGCACGCATA CGTCGGCACG
TTCATGAGTG CGATCGATAT GAACGGTTTT AGCGTCACCG TATGTGCGCT CGATGATGAC
ACTAGAGTGC AGCGCCTCGA GGCGCCGTGT TCATGCTCCG CGTGGCCGAA GACGGCAAAA
CTCACTCCTG CGAAGCTCTT GTCGGTGTCA GCGCCGGCTT CCGATAGAAA CGAAACCATC
GCGAGCGGGC CACCGACGAC TCCCGAGGGT GTCATGGCGT TGAAAGCTAT CAAGCGCGTC
GCAAAGGATC TCATCGCAGT GGAGGATACT CTCACAAAGT ACGACACCGC GGTCGGCGAC
GGCGATTGCG GCACCACGAT TCGCAAGGGC GCTGAGGCTT TAATGAAAGC TGCGGATACT
TACCCGATTG ACGATGTCTC GGCGCTTATG CGTGCTATCG GGGACACAAT CCGTCAGAAC
ATGGGCGGTA CGAGCGGCGT ATTGTACGAT ATCTTTTTCA CCGCCGCGGC GGATAAACTC
GCAAAGGTTG CCAAGGGCAA AGCGCCGAGC GTCGACATCG TCCTTCTTGC GTTCTCAACG
GGCGTGCAGG CGATGTGCCA GTACGGTGGC GCTCGCGCTG GTGATCGCAC GATGCTAGAC
GCGCTCGTTC CTGCGTTAAC AATGGCGACG ACGACGTATA TGTCGAAAAA GTCTGTCATC
GAAGTTGCGT CCGAAGCCGC AAAGGCGGCT GCGAACGGCG CCGAAGACAC AAAGAGCATG
AAGGCAAACG CCGGACGTTC AAGCTATGTC AACCAAGACG TGTTGAAGGA AACACCTGAC
CCCGGTGCAG TCGCGGCGGC GACGTGGATT AACGCAATCT TTGCTGCAGT GTCTGAAAGT
TGA
|
|---|
| Protein sequence | MSKKFLNAPD DVVSEMLDGV CLATPSIARI ADQNVLVHVR EGEDKVVVIS GGGSGHEPAM
AGYLGRGMLD AAVCGNVYAS PSVEAVLSAI RATTTDAGAA LVVMNYTGDR LNFGLAAERA
KLEGFDVEMV IVNDDCALAS DRVGIAGRRG LAGTLFAHKV AGAAADAGKS LKEVCAEARA
CVEATGTMGV ALQACTLPGS SGVAREIAEG TMELGLGIHG EPGAHTAKTT SADEVVETLM
TSIFAQNEKI GKLSEGSNVA LMVNSLGATP LMELYVAARA AFSWLAGVKK INVTHAYVGT
FMSAIDMNGF SVTVCALDDD TRVQRLEAPC SCSAWPKTAK LTPAKLLSVS APASDRNETI
ASGPPTTPEG VMALKAIKRV AKDLIAVEDT LTKYDTAVGD GDCGTTIRKG AEALMKAADT
YPIDDVSALM RAIGDTIRQN MGGTSGVLYD IFFTAAADKL AKVAKGKAPS VDIVLLAFST
GVQAMCQYGG ARAGDRTMLD ALVPALTMAT TTYMSKKSVI EVASEAAKAA ANGAEDTKSM
KANAGRSSYV NQDVLKETPD PGAVAAATWI NAIFAAVSES
|
|---|
| |