| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_43996 |
|---|
| Symbol | |
|---|
| ID | 5004577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | + |
|---|
| Start bp | 226036 |
|---|
| End bp | 227883 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640419998 |
|---|
| Product | ABC(ABCD) family transporter: long-chain fatty acid (ALDP-like protein) |
|---|
| Protein accession | XP_001420280 |
|---|
| Protein GI | 145351861 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.4859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.143202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGATC TGAAGAGCAA AGAGACGAGC GGCGCGGCGG CGACGGCGGC GGTGGGGCGG
AAAACGCGCG ACGCGGGACG GGGGAAGCGG ACGCGCGAGA TCGGGGTCGG GAAAGACTTT
TGGAACGAGT TGGGATATCT GTTAAAGGTG GCGTTTCCCA CGGCGGGGAG CCGAGGAGGG
CAGTTGTTGG GCGCGCAGTT CACGCTGCTC GTCATGCGCA CGCTGTTGAC GGTCAGGGCG
AATAAGGTGA ACACGTTCTA TTTGACCAAG GCCATCTCGA GCGCGTCGTG GAAGTTTTGG
GTGCGGTGGT TTTTCAACTT TGGCGGTTGG ATGGCGAGCG GCGTGGTGGT GAACAGCGGG
CTGCGATACA CCGAGAGTTT GATCACGATC GAACTCAGAG CGGCGTTGAC GAAGAAGGCG
CATAAGATGT ACATGGAAAA CAATAACTTT TACAAGACGG CGGTTTTGCG TCAAGGCGGG
TTGGATAACG TCGATCAACG CATCGTGGCG GACATCGACG CCTTCGCCAA GGAGACGGCT
TTCCTGTACG GGCACTCGTT CAAGCCCATT TTGGAGTTCA CGCTGAGCTT GACCGAAGCC
GCGAAGGAGT TGGGCTATTC TCGCCCGCTC GCGCTTTTCG CGTCACAAAT CATCATCACC
GGCGTTTTGC GATCCATCGC CCCGCGACTC GGACCGATGG TCGCTCGCGA AGCCGCGCTC
GAGGGCGGTT TCCGCCACAC GCACGCGCGC TTGATCGCTC ACGCGGAGGA AATCGCCTTA
TTAGACGGGG GCAAACGCGA GATTGAGATT TTAGATGAAG GCTTGGATAA TTTGGTCGTC
ACGCAGCGCT GGCATGCGCT GCAGCGTATT CGCAAGAGCG TCGCCGACAA CGTATCCAAG
TTCCAAGGCT TGCTCGTGGG CAGTATTTTC GTACACGTCC CGTTCATGAT GAAGGCATCA
GTGTCCGAAG GCGAGCGCAT TTCATCCTTC CGAGCCACCG AGGAGCTCAT GCTTCGATGC
GGCGGCGCGT TCACCGAAGT GTTGCTTCTC GGCAAAAATC TCGACGAACT CGCCGGATAC
ACGCACCGGC TTTCGCAACT GTTCAAAACG TTGGATCTCG CGAGCAAGGA AGCGCGCGAA
GACAAGGCTA AACTGGCTTC GGCAGGCGCT GACCACGCCG AAGGCTCGCC GATCGTGTTC
GATAAAGTCA CCGTAGGAGC GCCCGAGCCG GATGGCTCGC AACGCGTGTT GGTGAAGGAC
TTGACGCTCG CCGTGGCGTC GGGTCAACAC TTGTTGATAA CTGGTCCGAA TGGATGCGGA
AAAACGTCAT TGCTTCGCGT GTTGGCTGGA TTATGGGCGC CCGTGTCCGG CACCGTCACC
AGACCGTCTG GCGTATCCAG CATCATGTGG TTGCCGCAAC GGCCGTACTT GTTGCAAGGA
TCGTTGCGCG ATCAAGTCGT GTACCCGCGC GACGCGCGCA CGGAGAAGAT CGTCGACGCG
CGCGTGAAGG AGTGTCTGAT GATGGCTGGC CTGGCCAAAT TCGTGGACGG CTCCATGAAC
GTTGGATTAA ACACGCGGCA CTTGGAGTGG AACGATGTGT TGTCCGGCGG CGAGCGTCAG
AGAATCGGTT TCGCCCGCCT TTACTATCAC GCGCCAAAGT TTGCCATTCT TGACGAAGCG
ACGAGCGCAA TCAATCCAGA CGAAGAGTCC AAGCTGTACG AACGTCTCAT CGAAACCGAC
ACCACCGTCG TGAGCATCGC GCACAGGCTC GAGCTTAGAA AATTCCACAA GTTGGAACTC
AAAATCGCGG GCGACGGCGA AGGCGGTTTT CGAATCCTCA AACTTTAG
|
|---|
| Protein sequence | MLDLKSKETS GAAATAAVGR KTRDAGRGKR TREIGVGKDF WNELGYLLKV AFPTAGSRGG
QLLGAQFTLL VMRTLLTVRA NKVNTFYLTK AISSASWKFW VRWFFNFGGW MASGVVVNSG
LRYTESLITI ELRAALTKKA HKMYMENNNF YKTAVLRQGG LDNVDQRIVA DIDAFAKETA
FLYGHSFKPI LEFTLSLTEA AKELGYSRPL ALFASQIIIT GVLRSIAPRL GPMVAREAAL
EGGFRHTHAR LIAHAEEIAL LDGGKREIEI LDEGLDNLVV TQRWHALQRI RKSVADNVSK
FQGLLVGSIF VHVPFMMKAS VSEGERISSF RATEELMLRC GGAFTEVLLL GKNLDELAGY
THRLSQLFKT LDLASKEARE DKAKLASAGA DHAEGSPIVF DKVTVGAPEP DGSQRVLVKD
LTLAVASGQH LLITGPNGCG KTSLLRVLAG LWAPVSGTVT RPSGVSSIMW LPQRPYLLQG
SLRDQVVYPR DARTEKIVDA RVKECLMMAG LAKFVDGSMN VGLNTRHLEW NDVLSGGERQ
RIGFARLYYH APKFAILDEA TSAINPDEES KLYERLIETD TTVVSIAHRL ELRKFHKLEL
KIAGDGEGGF RILKL
|
|---|
| |