Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_43992 |
Symbol | |
ID | 5004339 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009365 |
Strand | - |
Start bp | 194223 |
End bp | 195764 |
Gene Length | 1542 bp |
Protein Length | 488 aa |
Translation table | |
GC content | 58% |
IMG OID | 640419760 |
Product | predicted protein |
Protein accession | XP_001420442 |
Protein GI | 145352199 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2219] Eukaryotic-type DNA primase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.440471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.072463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTTCG GCGCGCTGCG CACGAATCGA GAGAAAGCGG AAGCGCGCGC CAAGACCGCG CTCGAGCGAA AGTACGGCGG AAACGCGGCG CGGTTGGACG CGTACAACAC CGCGCCGGAT GACGAACGCT CCATCGAGTA CCTGGAGCGC GCGGCGATGG ATCGGTACGG CGTCTTGCGG GCGATCGACG ACGCGCGAAG CGGTGGGAAG AAGGATGAGG AATTGAAACG GGCGATCGCG AGCGCGGAGG AGGAATATAA CATGCGACGG ACGACGGGGG GGACGTTTGA CGCGGAGGGC GCGGCGAGAG ACGCGACGAG TCATTTTTTG TTGAGGTTGG CGAGCTGTCG AAGCGAAGAA CACAGGCGAT GGTTTCGGGA GAACGAGTTG GAGTTGTTCA AGTATCGGTA CGGTGAGCTG AGTTTGGACG CGAAGATGGA GTTTATGCGG ACGAATGGGT TTAACGATTA CGCGCGGGCG AGCGAGAAGG AAGTGCGGGA GAGACGGGAC GATTTGCGGG ACGTCTTGAT GGCGGACCAC GAGTATAGGC AGATGCGTCG AAGTCTCAGT AAAGATGGTA AGCTCGGGAC GATGGAGTAC CAGAGGATGT GCGAGGAAGC GGCGAGCGAG GCGTCGCGTT GGTTCGTCGT CGGTTTCGAA GAGGTGTGCC CGCTCGTCAA GTCGAGACGG GCGTACTTGA TCGGCGGAAA CGCGTGGATT CGTAAAGAAA CCCTCGATCA ACTCGTGTTC GGTCGGTTTA AGACGATGCT GAACAAGATG GTCGCCGAAG CCATCACGCT CTTCAACAAG TTTGAAAAGA AGGAGGCTCA CCGTTTGACG CCGCTTTTGA AATCTGTGCA CAACCGTCGA TCGGGAAGCG GGTACGATTT CCAAGGCGAA GACGGCACGA TGTCGATCGC CGGCATCGAA GCCACGCAAG AGTCTTTCCC GCTGTGCATG CGCCAGCTTT ACAAGGCGCT CAAGAAAGAT CATCACCTGA CGCACGGCGG TCGACGACAA CTGCAACTGT ATTTGAAGGG CATCGGCTTG CCTCTGGACC AGGCGCTCGT GTTTTGGAAG ACAGAGTTCA CAAAGCACCC GAAATGCTCC GCGGAGAAGT TTGAAAAAGA TTACGCGTAT GGTATCAGAC ACGCGTACGG TAAGGAAGGG AAGCGCGTCA ACTACACCCC GCACGCGTGC GGTCAGTGCA TCGCAGCGGA TCCGGGCGTG AAGGACGCGC ACGGTTGTCC GTTCAAGACG CTCACGTCTG GCGTCAAGGA TAACGGCGCA CGTTTGCACG AGTTGCTCGG TACGTTGAAA ATCTCTGGTG CTAAGTCGCA CGCGATTGTC GAGAAGGCGA CGAATATGCA CTACCAAATC GCGTGCGGTA TGACGTTTGC GGCGATTCAC GACGGCGTCG AAATCGAGGC GGGCGTGCAC ACGCCGCATC AATACTTCCA CGAGAGCAGG AAGATCCTCG CCCCGCCGAC TGCGAGCGAG GCGGTGCTCG GCGACGCGAA CGCTCAATCG GTTGCGGCGT GA
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Protein sequence | MVFGALRTNR EKAEARAKTA LERKYGGNAA RLDAYNTAPD DERSIEYLER AAMDRYGVLR AIDDARSGGK KDEELKRAIA SAEEEYNMRR TTGGTFDAEG AARDATSHFL LRLASCRSEE HRRWFRENEL ELFKYRYGEL SLDAKMEFMR TNGFNDYARA SEKEVRERRD DLRDYQRMCE EAASEASRWF VVGFEEVCPL VKSRRAYLIG GNAWIRKETL DQLVFGRFKT MLNKMVAEAI TLFNKFEKKE AHRLTPLLKS VHNRRSGSGY DFQGEDGTMS IAGIEATQES FPLCMRQLYK ALKKDHHLTH GGRRQLQLYL KGIGLPLDQA LVFWKTEFTK HPKCSAEKFE KDYAYGIRHA YGKEGKRVNY TPHACGQCIA ADPGVKDAHG CPFKTLTSGV KDNGARLHEL LGTLKISGAK SHAIVEKATN MHYQIACGMT FAAIHDGVEI EAGVHTPHQY FHESRKILAP PTASEAVLGD ANAQSVAA
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