Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_43955 |
Symbol | TPR5a |
ID | 5004336 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009365 |
Strand | + |
Start bp | 187844 |
End bp | 189241 |
Gene Length | 1398 bp |
Protein Length | 453 aa |
Translation table | |
GC content | 59% |
IMG OID | 640419757 |
Product | TRP-containing protein |
Protein accession | XP_001420268 |
Protein GI | 145351836 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0248757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0716262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GCGCAACAGA TGATGTCGAA CATGACGCCC GAACAGATGG CGCAGATGCA ACGCATGGCG GGGTCGATGG GCCTCGGCGC GCCGCCGGGC GCGGCGGAGG CGATGAAAAA TATGACGGCG GAGGACATGC GACGAGCGGC GCAAGAGATG GGGAACATGA CGCCGGAACA GTTGAAGACG CAGTACGAAC AGGCGCAGGG ACACGCGAAA GCGAGCGCGG ATTATCGATA CGCGGGGAGC GAGACGCTGA AGAAGGAGGG GAATAAACTC GTGGGAGAGG GGAAACACGC GGATGCGGTG GAGAAGTACG CGCGAGTGAA GGAAAACTTG AAGGATGATG TGAACGCGGC GGCGAAGACG CTGCGGTTGT CGTGCATGTT GAACATGGCG CTTTGTTTTA ACAAGATTGG GAAGCACGAC GGGGCGATTA GCGAGTGCAC CGAGGCGCTC GAGCTCGAAC CGCGGAGCTT GAAGGCGTAC TATCGACGCG GACAAGCGTA CGTGGCGAAG GGTGAGCTCG AACAAGGTGT GAATGATTTG ATGCGGGCGA ATAAGCTCAG TCCTGGAGAT GAGACAGTGG CGGGAGAGCT CGAAGCAGCC GTCAAGCGCA TGGAATCGCA AGGATTAGCC GTGCCGGCCG CCGCGCCGGA ATTCGACCAT CCCGAGGCGG CGCCCACGAC GAGCGCCGGC TCGAGCGGTA GTGCGATGCC GGGGATGCCT GGGATGCCGA CGCTCACGCC TGATGTTCAA GCACAGGTGA GCGCGATGAT GAGCGACCCG AACGCCATGG AGCAAATGTC GTCGATGATG GGCAACTTGT CCGACGATCA AATCGAGCAG ATGGCGGCGA CGAATCCCAT GATGGCGGGC ATGGACCCGG ATCACGTGAA AAAGGCAGCG GGCATGATGA AGAACATGAA GCCGGAGACT ATGCAAAGCA TGATGAAGAT GGCGCAGAGC ATGGGCACGG AGGGCGGGAA AGGCTTCGAC CCGAACGACC CCGAAATGAT GTCCAAGATG CAAAAGGAGT TGAACAACCC GGAGATGCGC GAGGCCATGG TTGAAATGAT CCAGGGTATG GATTCGGAGT CTTTGAAGGA GATGTCCAAG AGCATGGGCA TGACGATGGA CGACGCGCAA GCTGAGCAAG CGGTCAACGC TCTCAAGAAC ATTTCGCCAA AGACCATGGA ACGGATGCTC TCAATGGCTT CCGTCGCGGG CGGGATCTAC AGTCGATTCA AGCGACCGAT CGATTGGGCT ATGCGCAACA AGCGCACGGC GCTCAGCATC TTTGTCGTGT TCACGGCCAT GGGGACGACG TACGTGCTGC GATGGTGGCG TCGCCGCGGA GGAGCCGTGG AAGCGGCTGA CAACCAAACC TCGACCTCAA CGTTTTAA
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Protein sequence | AQQMMSNMTP EQMAQMQRMA GSMGLGAPPG AAEAMKNMTA EDMRRAAQEM GNMTPEQLKT QYEQAQGHAK ASADYRYAGS ETLKKEGNKL VGEGKHADAV EKYARVKENL KDDVNAAAKT LRLSCMLNMA LCFNKIGKHD GAISECTEAL ELEPRSLKAY YRRGQAYVAK GELEQGVNDL MRANKLSPGD ETVAGELEAA VKRMESQGLA VPAAAPEFDH PEAAPTTSAG SSGSAMPGMP GMPTLTPDVQ AQQMSSMMGN LSDDQIEQMA ATNPMMAGMD PDHVKKAAGM MKNMKPETMQ SMMKMAQSMG TEGGKGFDPN DPEMMSKMQK ELNNPEMREA MVEMIQGMDS ESLKEMSKSM GMTMDDAQAE QAVNALKNIS PKTMERMLSM ASVAGGIYSR FKRPIDWAMR NKRTALSIFV VFTAMGTTYV LRWWRRRGGA VEAADNQTST STF
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