Gene OSTLU_43937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_43937 
Symbol 
ID5004319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp114298 
End bp115152 
Gene Length855 bp 
Protein Length284 aa 
Translation table 
GC content62% 
IMG OID640419740 
Productpredicted protein 
Protein accessionXP_001420419 
Protein GI145352150 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00956853 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGT CCATAATCGA CGCGCACGTG CACGTGTGGC CGAGCGCGGA GGATTTCGCG 
TACGAAGACG GCAAAGCGCC TCCAGTTCCC GGGGCGGCGA ATGAGCTCAT CGCCGCGATG
GACGCCAACG GCGTGCGCGC GGCGATGATC GTGCAACCGA TAAACCTAGG GTTCGATCAC
ACGTACGTAG AGCGTGCGTT GGAGACGCAC GCCAATCGCT TCGTGGGGAT GTGTCTGGCG
AACCCGAGCG CGGGAGACGC CGGCGTCGAG GCGTTGGAGA AGCTCCTCGC GGGACGTTTT
CGCGGCGTCC GATTCAATCC AGGGCTATGG CCGAATGGCA AGGGTATGGA TGGCGAAATA
GGGAGAAAAA TGATGCGCGC GTGCGCGGCG CGAACGCCGC CCGCGGTGGT GGGTTTCATG
TGCTTCAACG GACTTGATTT GCACGTGGAC GAAATTCGCG CTCTTCTCAA AGCGGAACCG
ACGGTGCCGG TGCTGATCGA TCACTTCGGA TTCACCAAGG GCGTGGATGA TCCGAACTTT
GAGTTGTTAC AGGCGCTCGG GCGAGACTTC CCACAAGTGA GCGTGAAGGT TTCGGCGCAT
TTCCGCGTGC GCATAGAAAC GAGCGACGGA GGCGACTCGA CCGCGACGCA ATTGCGCGAG
CTCGTCAAGG TGTTCGGTCC ACATCGATTG ATCTGGGGGT CGGACTACCC TTTCGTCACC
GCCGAGGAGG GAGGCTACGC CGACGCGGTT CGAGTGCTCG AGCGGCAAAT AGGCGACGAC
GATCCCGCGC TCCTCGCGAA TATTAGAGGC GATAACTTTT TACGCCTGTT TCCTGGGGCG
CTCGGCGAGG CGTAG
 
Protein sequence
MRASIIDAHV HVWPSAEDFA YEDGKAPPVP GAANELIAAM DANGVRAAMI VQPINLGFDH 
TYVERALETH ANRFVGMCLA NPSAGDAGVE ALEKLLAGRF RGVRFNPGLW PNGKGMDGEI
GRKMMRACAA RTPPAVVGFM CFNGLDLHVD EIRALLKAEP TVPVLIDHFG FTKGVDDPNF
ELLQALGRDF PQVSVKVSAH FRVRIETSDG GDSTATQLRE LVKVFGPHRL IWGSDYPFVT
AEEGGYADAV RVLERQIGDD DPALLANIRG DNFLRLFPGA LGEA