Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_43937 |
Symbol | |
ID | 5004319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009365 |
Strand | - |
Start bp | 114298 |
End bp | 115152 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | |
GC content | 62% |
IMG OID | 640419740 |
Product | predicted protein |
Protein accession | XP_001420419 |
Protein GI | 145352150 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00956853 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCGT CCATAATCGA CGCGCACGTG CACGTGTGGC CGAGCGCGGA GGATTTCGCG TACGAAGACG GCAAAGCGCC TCCAGTTCCC GGGGCGGCGA ATGAGCTCAT CGCCGCGATG GACGCCAACG GCGTGCGCGC GGCGATGATC GTGCAACCGA TAAACCTAGG GTTCGATCAC ACGTACGTAG AGCGTGCGTT GGAGACGCAC GCCAATCGCT TCGTGGGGAT GTGTCTGGCG AACCCGAGCG CGGGAGACGC CGGCGTCGAG GCGTTGGAGA AGCTCCTCGC GGGACGTTTT CGCGGCGTCC GATTCAATCC AGGGCTATGG CCGAATGGCA AGGGTATGGA TGGCGAAATA GGGAGAAAAA TGATGCGCGC GTGCGCGGCG CGAACGCCGC CCGCGGTGGT GGGTTTCATG TGCTTCAACG GACTTGATTT GCACGTGGAC GAAATTCGCG CTCTTCTCAA AGCGGAACCG ACGGTGCCGG TGCTGATCGA TCACTTCGGA TTCACCAAGG GCGTGGATGA TCCGAACTTT GAGTTGTTAC AGGCGCTCGG GCGAGACTTC CCACAAGTGA GCGTGAAGGT TTCGGCGCAT TTCCGCGTGC GCATAGAAAC GAGCGACGGA GGCGACTCGA CCGCGACGCA ATTGCGCGAG CTCGTCAAGG TGTTCGGTCC ACATCGATTG ATCTGGGGGT CGGACTACCC TTTCGTCACC GCCGAGGAGG GAGGCTACGC CGACGCGGTT CGAGTGCTCG AGCGGCAAAT AGGCGACGAC GATCCCGCGC TCCTCGCGAA TATTAGAGGC GATAACTTTT TACGCCTGTT TCCTGGGGCG CTCGGCGAGG CGTAG
|
Protein sequence | MRASIIDAHV HVWPSAEDFA YEDGKAPPVP GAANELIAAM DANGVRAAMI VQPINLGFDH TYVERALETH ANRFVGMCLA NPSAGDAGVE ALEKLLAGRF RGVRFNPGLW PNGKGMDGEI GRKMMRACAA RTPPAVVGFM CFNGLDLHVD EIRALLKAEP TVPVLIDHFG FTKGVDDPNF ELLQALGRDF PQVSVKVSAH FRVRIETSDG GDSTATQLRE LVKVFGPHRL IWGSDYPFVT AEEGGYADAV RVLERQIGDD DPALLANIRG DNFLRLFPGA LGEA
|
| |