| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_26437 |
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| Symbol | SPD1 |
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| ID | 5004348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009365 |
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| Strand | - |
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| Start bp | 224625 |
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| End bp | 225584 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | |
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| GC content | 61% |
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| IMG OID | 640419769 |
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| Product | Spermidine synthase |
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| Protein accession | XP_001420452 |
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| Protein GI | 145352221 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.047075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAT ACGCCGACGA CGCGCCGCAG AGCGCGGACA AGTGCATCGG CGCGTGCGGT
GAGGGATGGT TGTGCGAGGT GAGCGAAATG TGGAAAGGCC AGGCGATGTC GCTGAAGATC
GACGAGGAGC TGTTCCGCGG ACGGAGCGAG TTTCAAGACG TGTACGTGTT TAAAAACTCG
GCGTACGGGA ACGTGCTGGT GCTGGACGGG GTGATTCAGG CGACGGAGCG GGACGAGTTC
GCGTACCAGG AGATGATAAC GCACCTGCCG CTGTGCGCGC TGAACGAGGA ACCGAAACGC
GTGCTCGTCG TCGGTGGCGG CGATGGAGGC GTGCTCAGGG AGGTGACGCG ACACGGATCG
ATCGAAAGGA TCGAGATCGC GGAGATCGAT GGGATGGTGG TGGAGATGTC GAAGAAATTC
TTGCCGTCGA TGGCGGTGGG GTTCGACGAC GCGCGAGTGG AGGTGAATAT TTGCGATGGG
ATCAAGTACG TCGGGGACGC GGAGGAGGGG ACGTACGACG CCATCATCGT CGACTCGAGC
GATCCGATCG GACCGGCGAG CGTTTTGTTC GAGGAGGCGT TCTTTAAAAA GATGCACCGC
GCGCTCAAGC CCGGCGGCGT CGTGTGCACG CAAGCCGAGT GCGTGTGGTT GCACATCGAT
TTGATCGAGG ACTTGGCGAA GATGTGCAAG GGTATTTTCG TCGGTGGGTC CATGGCGTAC
GGGTACACCA CGATACCGAC TTACCCGAGC GGACAAATCG GTTTCATGAT GTGCAGCAAA
CCCGCGGCGG ACGGGTCGAC GGTGGATTTC ACCAAGGCCA AGCGATTTCC GCGACCCGCC
GATGAAAGCG CGCTGAAACC GATGCGCTAT TATAACCCGC AAGTGCACGC CGCGGCGTTC
GTGCTGCCCG AGTTCGCTCG CGCCGCGCTC GAGCCGCACC TCGTGCCGGG TTCCGAGTAA
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| Protein sequence | MNKYADDAPQ SADKCIGACG EGWLCEVSEM WKGQAMSLKI DEELFRGRSE FQDVYVFKNS
AYGNVLVLDG VIQATERDEF AYQEMITHLP LCALNEEPKR VLVVGGGDGG VLREVTRHGS
IERIEIAEID GMVVEMSKKF LPSMAVGFDD ARVEVNICDG IKYVGDAEEG TYDAIIVDSS
DPIGPASVLF EEAFFKKMHR ALKPGGVVCT QAECVWLHID LIEDLAKMCK GIFVGGSMAY
GYTTIPTYPS GQIGFMMCSK PAADGSTVDF TKAKRFPRPA DESALKPMRY YNPQVHAAAF
VLPEFARAAL EPHLVPGSE
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