| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_26376 |
|---|
| Symbol | |
|---|
| ID | 5004288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | - |
|---|
| Start bp | 111600 |
|---|
| End bp | 112178 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 640419709 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420418 |
|---|
| Protein GI | 145352147 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1603] RNase P/RNase MRP subunit p30 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.00816828 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCGC TGGGAGAGGA TCTGGAGAAG TTTGACGTGC TGGCGCTGGA ACCGACGAGC
GAGCGGGCGT TCGCGAGCGC GTGCGCGAAT AAACACGCGG ACGTGGTGAG CGTCGGCGCG
GGGCGGCGGT TGAGGTACAA GTTTACGGCG AGCGCGGTGA GGGCGGCGAC GGGGAATCGG
ATATCGTTTG AGCTGTGCTA CGGGGAGGCG CTGAGGGATT CGAACTCGAG GATGTGGTTC
TTCGCGAACG CGAGCGCGCT CGCGCGGGCG ACGCGCGGCG GACGCGAACT GTTCATCTTG
TCGAGCGGCG CGGAGCGCGC GATCGAGTTG CGATCGATGT ACGACGTGGT GAACTTGGCG
ACATTTTTCG GGATGACGGA AAAGGCGGCG AGGGCGGCGA TGACGACGAA CGTGCACGCG
ATGTTGGCGA TGTGTAAACG TCGGAGAGAC GCCGCGGCGA CGGACAGCGT CGTCGAACGC
ATGGACGCGT CCGCTTAGTC GACGCAGCTC GTTCTTTGGA CGCGTCCGCT TAGTCGACGT
AGCTCGTTTG TTGTATTATT ATCGTTCGTT GTTGAAGCG
|
|---|
| Protein sequence | MLALGEDLEK FDVLALEPTS ERAFASACAN KHADVVSVGA GRRLRYKFTA SAVRAATGNR
ISFELCYGEA LRDSNSRMWF FANASALARA TRGGRELFIL SSGAERAIEL RSMYDVVNLA
TFFGMTEKAA RAAMTTNVHA MLAMCKRRRD AAATDSVVER MDASA
|
|---|
| |