| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_193 |
|---|
| Symbol | |
|---|
| ID | 5004564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | + |
|---|
| Start bp | 373504 |
|---|
| End bp | 376047 |
|---|
| Gene Length | 2544 bp |
|---|
| Protein Length | 811 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640419985 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420320 |
|---|
| Protein GI | 145351945 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1643] HrpA-like helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0944524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCAAACTGC TGGAGTTGGA ACTCGCGAAG GAAAGCACGA AAGAGTGGCT TGGTATGCAA
GAAATTCGGC GCAAACTTCC AGCTCACAAT TTGAAGAGTG TCGTGCTTGA AGCGATTGAG
AGCTCCAATG CGGCTGTAGT GAGCGGCGCA ACCGGTTGCG GGAAGACAAC ACAAGTTCCA
CAGTTTATAT TCGAAGAAGC CATTAGGGCG GGCAAGGCTG GAGATACGAG CATCATCATC
ACGCAACCGA GGCGTCTTTC GGCCATCGCG GTCGCCGAGC GCGTCGCGAA TGAGCGTTGT
GAACGCATCG GTGACACCGT CGGCTACAGC ATTCGGTTGG AAAGCAAGCA AAGCGAGAAA
ACGCGAATGC TGTTCTGTAC GACTGGTATC CTCCTCCGAC GTTTACAGAC TGATCCGAAT
TTAACTGGCG TATCGCACGT TGTCGTTGAT GAGGTCCATG AGCGTGATTT ACTGAGTGAT
TTCTTGCTAG TCATTCTCCG ATCACTCGCA GCGAGGAGGA GTGATTTTCA TCTCGTGGCC
ATGTCCGCTA CGGTGAACGC CGACTTGTTT AAAAACTATT TCGAGTCGCA CCTGAAAACA
ACGTGTCCAG TCGTGGAGAT ACCCGGTAGG ACGTTTCCCG TGGCGGAATA TAGATTAGAG
GACGCTATCG AAGCCACGGG CTACGTGTGC GAGCCCGATG GCGAGTTCGC GCTCGGCGTC
GAGCAGAGCC GCGGCGGGAG GATTTTTAAG ATGGCCGGAG GTGGCGGCGC TCGCGGGGCG
GCGCTTCGCG AAGCCGTTGA GGAGTCGTTC GAACGTTCTG CGATGAGCGA GGTTCGACAA
GAGACGCGTG ATATGTATCC CGAGTACAGC GAGACCACTT GGAAGAGCTT GCAAGTCATC
GATGAAGAGA AGATCAATTA CGAATTGATG GAGCTGCTCG TAGCGCTCAT CGCGGACGAG
TACGAGGAAG GAGCGATATT GATCTTCTTG CCAGGGATGG CGGAAATTCG AACGCTTCAT
GATCGACTTC GTGCGAATTT AAAAGATTCA GAGTCGCGAT TTTTGCTCAT CCCTTTGCAC
TCGACACTGA GTTCTGAAGA GCAGCGCTTA ACGTTCAATA AAGCTCCACC GGGAAAGCGG
AAAGTCGTCA TGGCGACGAA CATTGCGGAG ACGTCGATCA CGATTGACGA CGTTGTCTTC
GTTATAGACA GCGGTCGCGT GCGCGAAACA CAATACGATC CGGTATCGAG AATGTCGGCT
CTCGTCACCG CTTGGTGCAG CAAGGCGAGT AGTCGACAGC GTCGTGGTCG GGCCGGTCGC
GTACGCGAAG GCTATTGCTT TCACCTGTAC AGCACAAAGA CTGAAGCGAC CGTGCTGGCG
GACTTTACGA CGCCAGAGAT TTTGCGCACG CCGCTCGACG CGCTGTGTTT ACAGATCAAG
ATTCTAGGTC TTGGAGACAT TCGCAAGTTT TTGTCCATGG CCATCGAGCC ACCGCCTGAA
GGCGCCATCG CGTCGGCGCT GAAATCTTTA CACGAACTCG ACGCAGTGGA CTCAAAGGAT
GAACTCACCG CGCTCGGGCA TCATCTCGCT GAACTCCCAG TCGACGCTCG GCTTGGAAAA
ATGATGCTAT ATGGTGCGAT GTTTTCGTGC TTGGATCCTA TTCTCACCAT TGCCGCCGGT
GTTGGGTTTC GCTCCCCCTT TTTAGCGCCG ATGGACAAGC GCGACGAGGC CGACGCGGCG
AAGCGCAAAA TCGCCGCACA AGCAAGTGAC CATCTCACGC TGGTGCGAGC ATACGCTGGT
TGGATCCACG CGAGGGCCAA GGGTCGTGGT TTCGAACGGG ACTACTTGTC CAAGCTGTTT
CTCTCCGGAC AGACGTTGAA ACAAATTTCA GAGATGCGAC AGCAGTATAC CGATTTGTTG
GACCAAATTG GATTTTTGCG ATCCGGTGCG GGCGCTCTCG GGGCCGTTTC TGCGTCACCC
GCACCGCTCG CTACGAACAA ACTGAAAAAC GGGCGGCGGA ACAAACTCGA GAGTGCACTC
GCAGAAGCGA GTGTGAACGC GGGGAACGAG TCACTCGTGC GTGCTGTCAT TTGCGCTGGT
CTTTATCCAA ACGTCGCGTT GGCGAGCGCG CCTGCGAAGA CAGACGACGG TCGCGCGCGG
TCGCGCTACC CCACTAGCTC CGTCGCCGTG CGCACCAAGC ACGATACGGA CGTGCACATG
CATCCAACAT CAGTGTGTTA CGGCATGTCG CCAAGTGTCG ACAGCCGGTT TCTGCTCTAT
CACGAAAAAG TTCGTACGAC CAAGGTGTAC ATTCGCGACG CCACCGCCGT CGGGTCGTAC
CCGCTGTTAC TCTTCGGCGG TAAAATCAAA ATCAATCACG AAAGATCGAG CGCGACGTGC
GATAATTGGA TAAATTTTCG CGCAGCACCT AGAGTTGCGG TCCTCTTCAA GCATTTACGC
GCCGAACTAG ACGCGTTGCT CATGGAGAAG ATTGCTTCAC CCGACATGGA CATTTCGCAC
AGACGCGACG TCGTGAAATC CATA
|
|---|
| Protein sequence | RKLLELELAK ESTKEWLGMQ EIRRKLPAHN LKSVVLEAIE SSNAAVVSGA TGCGKTTQVP
QFIFEEAIRA GKAGDTSIII TQPRRLSAIA VAERVANERC ERIGDTVGYS IRLESKQSEK
TRMLFCTTGI LLRRLQTDPN LTGVSHVVVD EVHERDLLSD FLLVILRSLA ARRSDFHLVA
MSATVNADLF KNYFESHLKT TCPVVEIPGR TFPVAEYRLE DAIEATGYVC EPDGEFALGV
EQSRGGRIFK MAGGGGARGA ALREAVEESF ERSAMSEYSE TTWKSLQVID EEKINYELME
LLVALIADEY EEGAILIFLP GMAEIRTLHD RLRANLKDSE SRFLLIPLHS TLSSEEQRLT
FNKAPPGKRK VVMATNIAET SITIDDVVFV IDSGRVRETQ YDPVSRMSAL VTAWCSKASS
RQRRGRAGRV REGYCFHLYS TKTEATVLAD FTTPEILRTP LDALCLQIKI LGLGDIRKFL
SMAIEPPPEG AIASALKSLH ELDAVDSKDE LTALGHHLAE LPVDARLGKM MLYGAMFSCL
DPILTIAAGV GFRSPFLAPM DKRDEADAAK RKIAAQASDH LTLVRAYAGW IHARAKGRGF
ERDYLSKLFL SGQTLKQISE MRQQYTDLLD QIGFLRSGAG ALGAVSAVNA GNESLVRAVI
CAGLYPNVAL ASAPAKTDDG RARSRYPTSS VAVRTKHDTD VHMHPTSVCY GMSPSVDSRF
LLYHEKVRTT KVYIRDATAV GSYPLLLFGG KIKINHERSS ATCDNWINFR AAPRVAVLFK
HLRAELDALL MEKIASPDMD ISHRRDVVKS I
|
|---|
| |