Gene OSTLU_17444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17444 
Symbol 
ID5004438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp540978 
End bp541658 
Gene Length681 bp 
Protein Length226 aa 
Translation table 
GC content67% 
IMG OID640419859 
Productpredicted protein 
Protein accessionXP_001420542 
Protein GI145352410 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00537] HemK-related putative methylase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.530661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.176894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGT CACCGTCGAA TCTCGCCTCC ATGGCGAAGA TCGCGACGCA CGAAAGCGTG 
TACCCTCCCG CGGAAGACTC CTTCCTCCTC GTCGACGCCC TCGCCGCGCT CTGGGACGAC
GAGCTCGCGC GCTCGCGTCC CAAACTCTGC ATAGAGCTCG GTACTGGAAG CGGTTACATC
GCGTGTTCCA ACGCCCTGCT CGCGCGCGCG CACGGATGCG GCGACGTCAC GCGCACGCGC
GCGTCTGACA TCAATCCCGA CGCCGTCGCG GCGTGTCGAG CGACGTGCGA GGCGCACGGG
GTGAGCGGGA CGGAGTGCGC GACGGCGCTC GGCGACTTGC TCGAACCGCA CGCCGACGCG
CTCGCCGACG CCGGTGGGTG CGATGTGCTC GTATTCAATC CACCATACGT CGTCACGCCG
AGCGAAGAAG TGGGCGGGCG CGGCATCGAG GCCTCGTGGG CGGGCGGCGC GCGAGGGCGC
GAGGTGCTCG ACCGACTGTT GCCGAGCGTG CGAAGCGCGT TGGCGCCGAG AGGGATGTTT
TTGTGCATTT TATTAGCGCA GAACGAGCCC GAGGAGGTGA TGGAGATCAT GCGTCGCGAC
GGTCTGCGAT GTTCGCTCGT GAGCTCGTGT AACGCGGACG AGGAGGCGTT GTTCGTCTTG
CGGTGCGACA GAGACGCGTG A
 
Protein sequence
MAPSPSNLAS MAKIATHESV YPPAEDSFLL VDALAALWDD ELARSRPKLC IELGTGSGYI 
ACSNALLARA HGCGDVTRTR ASDINPDAVA ACRATCEAHG VSGTECATAL GDLLEPHADA
LADAGGCDVL VFNPPYVVTP SEEVGGRGIE ASWAGGARGR EVLDRLLPSV RSALAPRGMF
LCILLAQNEP EEVMEIMRRD GLRCSLVSSC NADEEALFVL RCDRDA