Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_17414 |
Symbol | |
ID | 5004412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009365 |
Strand | - |
Start bp | 488410 |
End bp | 489927 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | |
GC content | 67% |
IMG OID | 640419833 |
Product | predicted protein |
Protein accession | XP_001420525 |
Protein GI | 145352375 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.431136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCG TCGACGCGGT CGCGCGCGTC GCGACGACCG GGCGCGGGCG CGCGACGTTG GTTTTGGGCG ACGGGACGCG CGTCGTGCGC GTCGAGGACG TCGTGCGCGT CGAGGTTCGG CGTCGACGTC GTCGGCATCG GCATCATCGA GATGAAGACG ACGACGCGCG GACGCTCGCG GTGACGGCGA TCGCGCGGCG ACGCGGATTC CCGGGAATAT CGACGCGCAA GAGAAGCGCG CGACGGTTGA AGACGCACGA GACGGCGTGC GCGACGGCGG CGGTGGCGAA CGAGGCGAGG ACGCGGTGCG CGGAGGCGTG CGGGCTCGAC GACGCGGACG CGAGCGGGAC GGCGAGGGAG AGACGGCGGC GGGTGCTGGT GATCGTGAAT CCGCGAAGCG GACGAGGCGA GGGGACGAAG ATATGGGAGA CGAAGGCGCG CGCGGTGTTG GAGGCGGCGA ACATCGAGTG CGCGACGCGG ACGACGAAGG CGCGAGGAGA GGCGACGAAC ATCGCGCGAG AGCTCGACGC GAGTCTGTAC GACGGCGTCG TCGCCGTGGG GGGGGACGGG ACCGTGGCGG AGCTGTTTCA AGGGCTGAGC GAACGCGAGG ATCGAGAGGA GATTTACGCG AAGATGCCGA TCGGAATCGT GCCGGCGGGT TCGGGGAACG CGCTGTGCAA GTCGATTCAG CACGCCGGCG GCGAACCGTG CGATCCGGTG AGTTGCGCGC TGACGATCGC GCGGTGGCGC ACGCGCGCGC TCGATCGATC GGAAGTGCGG TTTCAAGATT CTAAAACCGC ATCGGGTTGG GGGGATGACT CGAAAGTCAC GCACTCGCTG CTGTCGACTT CGTGGGGATT TTTCTCCGAC GTCGACATCG AGAGCGAGCG GTTTAGATTT CTAGGAGGCG CGCGATTCAC GCTGCAGGCC ATCGTGCGGA TATTAGCCAG AAGAAAGTAC CAGTGCGAAC TTTTATACGA AACCACCGAA GAGGGCGAGG CGTACAACGC CCAACACTGC GACGGGCCGC ACGGCGAACC GGTGCCGGGT CGACCGGGAT GGCGCCGCGT CGCCGGCGAC GTCCTCGGTC TCTGGGCGCT CAACGTGCCT TGGGGCACCG AGTCCACCTT AGCGGCTCCT CACGCGAAGT TTGACGACGG TTCCATCGAC GTCGTCCTGG TGAACGTCAC CAATCGCAAG AACATGCTCA AACTTTTGCT CGATTTCGAC GCCGGCGACC ACGCGCGCAA TCGCGCCGTC CGTTACATCA AAGCCAAATC CTTCGAAATC TACCCCGCCG CCGCCGCCGC CGCCGCCGCC ACCGCCGCCG CCATCGTCGA CGCATCCTCG GAGACCAACG CCACCGCTCC CGGCGGCGGC GGTTACATCG CCGTCGACGG CGAAGTCCTC GCCTCGCGGC GGTTTCGCGC CGCCGCCGCC GCCGCGTTCC CGTACGGTCC GTTTCGATGC GACGTCATTC GCGCCGCGTG CGCCGTCTTC GCCCCTCCTA GCGCTTAA
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Protein sequence | MATVDAVARV ATTGRGRATL VLGDGTRVVR VEDVVRVEVR RRRRRHRHHR DEDDDARTLA VTAIARRRGF PGISTRKRSA RRLKTHETAC ATAAVANEAR TRCAEACGLD DADASGTARE RRRRVLVIVN PRSGRGEGTK IWETKARAVL EAANIECATR TTKARGEATN IARELDASLY DGVVAVGGDG TVAELFQGLS EREDREEIYA KMPIGIVPAG SGNALCKSIQ HAGGEPCDPV SCALTIARWR TRALDRSEVR FQDSKTASGW GDDSKVTHSL LSTSWGFFSD VDIESERFRF LGGARFTLQA IVRILARRKY QCELLYETTE EGEAYNAQHC DGPHGEPVPG RPGWRRVAGD VLGLWALNVP WGTESTLAAP HAKFDDGSID VVLVNVTNRK NMLKLLLDFD AGDHARNRAV RYIKAKSFEI YPAAAAAAAA TAAAIVDASS ETNATAPGGG GYIAVDGEVL ASRRFRAAAA AAFPYGPFRC DVIRAACAVF APPSA
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