Gene OSTLU_17414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17414 
Symbol 
ID5004412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp488410 
End bp489927 
Gene Length1518 bp 
Protein Length505 aa 
Translation table 
GC content67% 
IMG OID640419833 
Productpredicted protein 
Protein accessionXP_001420525 
Protein GI145352375 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.431136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG TCGACGCGGT CGCGCGCGTC GCGACGACCG GGCGCGGGCG CGCGACGTTG 
GTTTTGGGCG ACGGGACGCG CGTCGTGCGC GTCGAGGACG TCGTGCGCGT CGAGGTTCGG
CGTCGACGTC GTCGGCATCG GCATCATCGA GATGAAGACG ACGACGCGCG GACGCTCGCG
GTGACGGCGA TCGCGCGGCG ACGCGGATTC CCGGGAATAT CGACGCGCAA GAGAAGCGCG
CGACGGTTGA AGACGCACGA GACGGCGTGC GCGACGGCGG CGGTGGCGAA CGAGGCGAGG
ACGCGGTGCG CGGAGGCGTG CGGGCTCGAC GACGCGGACG CGAGCGGGAC GGCGAGGGAG
AGACGGCGGC GGGTGCTGGT GATCGTGAAT CCGCGAAGCG GACGAGGCGA GGGGACGAAG
ATATGGGAGA CGAAGGCGCG CGCGGTGTTG GAGGCGGCGA ACATCGAGTG CGCGACGCGG
ACGACGAAGG CGCGAGGAGA GGCGACGAAC ATCGCGCGAG AGCTCGACGC GAGTCTGTAC
GACGGCGTCG TCGCCGTGGG GGGGGACGGG ACCGTGGCGG AGCTGTTTCA AGGGCTGAGC
GAACGCGAGG ATCGAGAGGA GATTTACGCG AAGATGCCGA TCGGAATCGT GCCGGCGGGT
TCGGGGAACG CGCTGTGCAA GTCGATTCAG CACGCCGGCG GCGAACCGTG CGATCCGGTG
AGTTGCGCGC TGACGATCGC GCGGTGGCGC ACGCGCGCGC TCGATCGATC GGAAGTGCGG
TTTCAAGATT CTAAAACCGC ATCGGGTTGG GGGGATGACT CGAAAGTCAC GCACTCGCTG
CTGTCGACTT CGTGGGGATT TTTCTCCGAC GTCGACATCG AGAGCGAGCG GTTTAGATTT
CTAGGAGGCG CGCGATTCAC GCTGCAGGCC ATCGTGCGGA TATTAGCCAG AAGAAAGTAC
CAGTGCGAAC TTTTATACGA AACCACCGAA GAGGGCGAGG CGTACAACGC CCAACACTGC
GACGGGCCGC ACGGCGAACC GGTGCCGGGT CGACCGGGAT GGCGCCGCGT CGCCGGCGAC
GTCCTCGGTC TCTGGGCGCT CAACGTGCCT TGGGGCACCG AGTCCACCTT AGCGGCTCCT
CACGCGAAGT TTGACGACGG TTCCATCGAC GTCGTCCTGG TGAACGTCAC CAATCGCAAG
AACATGCTCA AACTTTTGCT CGATTTCGAC GCCGGCGACC ACGCGCGCAA TCGCGCCGTC
CGTTACATCA AAGCCAAATC CTTCGAAATC TACCCCGCCG CCGCCGCCGC CGCCGCCGCC
ACCGCCGCCG CCATCGTCGA CGCATCCTCG GAGACCAACG CCACCGCTCC CGGCGGCGGC
GGTTACATCG CCGTCGACGG CGAAGTCCTC GCCTCGCGGC GGTTTCGCGC CGCCGCCGCC
GCCGCGTTCC CGTACGGTCC GTTTCGATGC GACGTCATTC GCGCCGCGTG CGCCGTCTTC
GCCCCTCCTA GCGCTTAA
 
Protein sequence
MATVDAVARV ATTGRGRATL VLGDGTRVVR VEDVVRVEVR RRRRRHRHHR DEDDDARTLA 
VTAIARRRGF PGISTRKRSA RRLKTHETAC ATAAVANEAR TRCAEACGLD DADASGTARE
RRRRVLVIVN PRSGRGEGTK IWETKARAVL EAANIECATR TTKARGEATN IARELDASLY
DGVVAVGGDG TVAELFQGLS EREDREEIYA KMPIGIVPAG SGNALCKSIQ HAGGEPCDPV
SCALTIARWR TRALDRSEVR FQDSKTASGW GDDSKVTHSL LSTSWGFFSD VDIESERFRF
LGGARFTLQA IVRILARRKY QCELLYETTE EGEAYNAQHC DGPHGEPVPG RPGWRRVAGD
VLGLWALNVP WGTESTLAAP HAKFDDGSID VVLVNVTNRK NMLKLLLDFD AGDHARNRAV
RYIKAKSFEI YPAAAAAAAA TAAAIVDASS ETNATAPGGG GYIAVDGEVL ASRRFRAAAA
AAFPYGPFRC DVIRAACAVF APPSA