Gene OSTLU_17407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17407 
Symbol 
ID5004407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp475291 
End bp475959 
Gene Length669 bp 
Protein Length222 aa 
Translation table 
GC content50% 
IMG OID640419828 
Productpredicted protein 
Protein accessionXP_001420353 
Protein GI145352012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.341079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG GTGCGATGCG CCCGTGGTTT CTTCGCGACG AGGATAGGCG CAGGAGCCTC 
GTATACGGCG TGGGTGCGGT CGCTTTCGCC CTCTTGGGGT TGGTCGTGAC TACTGGTTCG
AGGACGGAGT ATAAGGTGGT TGCGTACAAG CCAAGTCTTT ATGAACACGT CGGGTCGCAT
CAAGTCAAAG CCCACTATGA CATTTACCCG GATACACATG ACATTCACCA GGCAGATCAC
CCTTCTGAGG ATCCTGCAGA TCCTGAAGAG GAACTAGTTT ACAAATATAA TGGTAAGCAT
GTTTCTTCAG CAAACGAGAA TCGGATTCGG GCACTGTACT CGCCATCAGG CTCGTCCTTC
ATAGATGTGG TCAAACGGGA AGGTGTGGAC GACGCTACCA TTTTCGAGAC GTGTCTGTAT
CCAACAGTGA CAGCTGAATT CAGGACGTAC TACGGCCACG ATCTGACAAT CGAACCAGAT
ACGACGAGCA AGGATCTAGG GAAGCCGGTG AACCAAGTCG AAGCACACCA ATTTGGTTGC
GTGTGGGAGA AGTTGTTGAA TAAACTAGCG GAGTCGAACT GGAAATTCGT CACGTCCGAA
ACGATTATGA CTGAAAAGAC GTTCTATGAG ATGCATATGA TTACGTTCTC ACGAAAAAAG
ACTACGTAA
 
Protein sequence
MSDGAMRPWF LRDEDRRRSL VYGVGAVAFA LLGLVVTTGS RTEYKVVAYK PSLYEHVGSH 
QVKAHYDIYP DTHDIHQADH PSEDPADPEE ELVYKYNGKH VSSANENRIR ALYSPSGSSF
IDVVKREGVD DATIFETCLY PTVTAEFRTY YGHDLTIEPD TTSKDLGKPV NQVEAHQFGC
VWEKLLNKLA ESNWKFVTSE TIMTEKTFYE MHMITFSRKK TT