| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_17261 |
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| Symbol | PAFE3501 |
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| ID | 5004330 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009365 |
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| Strand | + |
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| Start bp | 160506 |
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| End bp | 161953 |
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| Gene Length | 1448 bp |
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| Protein Length | 447 aa |
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| Translation table | |
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| GC content | 59% |
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| IMG OID | 640419751 |
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| Product | predicted protein |
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| Protein accession | XP_001420262 |
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| Protein GI | 145351823 |
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| COG category | [K] Transcription |
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| COG ID | [COG5157] RNA polymerase II assessory factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.474377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0107383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCTT TGCGTTTGAT TAGAGATCAT ACCATCGCCG GTATAATCGC CGAGTGCGTC
CTCGACGCGC CGCCGCTCAC GCGCTCACGC GCCGCGCGCC GCGCGGAAAC GGTTCGAACG
CGCGCGACTG ACGATGGGCG CTCGAAACGG GACGTAGGTC GACGCACGAC GATGAAAGGA
TTCACCTGAA GGATGTCGAC GTCGAGCTCC GGCGGACGAC GGAGACGAAT TACAGATCCA
AGGCTGGGAA CAAGCTGCTG AAGGTGGAGG CGATATGGTA TTTCATCAAG TATCACGTTG
CGAACCCCGA CGCGGCGCAC ACGGCTTACA TGAAGGCGGC GATCGCGGCG GGGTTCTCGA
CGCTGTCTAT GTTGGATCGG AAAGATTTGA TCGCGTACTT GACGGGGGAG CGAGCTACGA
GCGATCGAAT CGATATCACC GTGCCGGTGA TCGTGGATGA GGAGGGTGTG TCGACGGTTG
ACGCGAAACG CGCGCGCGAG GAAGACGAGG CGGAAGGCGT GCCGCGAGAG CGCGTGTTAA
GAGATAGGAA CTCAGTGCTT CGCGCGCCGA AGGATATGAC GAGCGTGTTG GATTTCTTCG
CGGCGCCGGA GGAGGAGAAG GAACGTTTAG AAGAGGAGAA GCAGCAGGCG GCTGATTTAG
CCAAGGGGAT TAAAAACCAG AGATATCGCG ACGTGAAGGA GCAGGTGTTT TGGAGAGAGC
ACGTCGGGAG CGACTTTGAT ATGATGAATT TGGACACCAA TGCGTCCTTC TTGAGTGGGC
CCAAGCCACC CGTAGACGAC GGCACCGACA TGTTGATGAC GGACGCACGC GCGATGGAAA
AACAGCCGAC CGCACCGAGC GGTCCGTCGA CTGCGAGTCG TGGAGGACCC GCTGCGGCCG
CCAAGGCTCC GCGCAAGACA TCAGGCAAAC CGGGCGGCGT CCCGATCATC ATCGTCCCCG
CCGGGTTCAA TCAAAAGGTC GTTCTCAACA TGTTCAACGC CAAGGAGTTC TTGCAGGACG
GCAAGTTTAC GCAGTGGGAT GTGGTGCAAA AAGGCGGCGC TAAAAAGTCA AGCTCCGTGT
ACATTTCGCG CACGTACAAG CGCGACGGCG CCAAGGTCAA GTACGAAGTC ACCGAAAAAG
CCCCTCACAA ACGTTCCGAA GACTGGGCCC GCGTCGCCGC GGTCTTCGTC CTCGGTGCTA
AGTGGCAATT CAAAGACTGG CCCTTCCGCG GCGTCGAAGA CGGTGATCTC GTCGAAACCT
TCACCAAGAT TCGCGGCTTT CACGCCCGCT TTGACGGCGA TCCCGAAGTC GACGTCGTCA
AGACCTGGAA CGTCAAGCCC ATCACCATCA GTCGCACCAA GCGTCACGGC GATCGCGCCG
CGTTCGAGTT CTTCTGGGAC GAGCTCGATC GTCACCTCGC CCTTCGTAGC AGCGCCTTGA
AGTATTAA
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| Protein sequence | MDPLRLIRDH TIAGIIAEST HDDERIHLKD VDVELRRTTE TNYRSKAGNK LLKVEAIWYF
IKYHVANPDA AHTAYMKAAI AAGFSTLSML DRKDLIAYLT GERATSDRID ITVPVIVDEE
GVSTVDAKRA REEDEAEGVP RERVLRDRNS VLRAPKDMTS VLDFFAAPEE EKERLEEEKQ
QAADLAKGIK NQRYRDVKEQ VFWREHVGSD FDMMNLDTNA SFLSGPKPPV DDGTDMLMTD
ARAMEKQPTA PSGPSTASRG GPAAAAKAPR KTSGKPGGVP IIIVPAGFNQ KVVLNMFNAK
EFLQDGKFTQ WDVVQKGGAK KSSSVYISRT YKRDGAKVKY EVTEKAPHKR SEDWARVAAV
FVLGAKWQFK DWPFRGVEDG DLVETFTKIR GFHARFDGDP EVDVVKTWNV KPITISRTKR
HGDRAAFEFF WDELDRHLAL RSSALKY
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