Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_1511 |
Symbol | |
ID | 5004415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009365 |
Strand | + |
Start bp | 495479 |
End bp | 497158 |
Gene Length | 1680 bp |
Protein Length | 560 aa |
Translation table | |
GC content | 60% |
IMG OID | 640419836 |
Product | predicted protein |
Protein accession | XP_001420359 |
Protein GI | 145352024 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.485737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TCGTTCGAAG AGTGCGGGCT TCCGGCGTCG ATGGTGAAGC ACTTGATGGA GAATGTGGGG TTCGGCGCGC CGACGGCGGT GCAGGCGAAG ACGATTCCGC GATTGTTGGC GGGACGGGAC GTTTTAGTGC GCGCGGAGAC GGGGTCGGGG AAGACGCTGA GTTACATCGC GCCGTTGTAT AGTAAAATTG GAGGGATCAC GCCGCGAGTG ACTCGAGAGG AAGGCACGCG AGGGTTGGTG CTCGTGCCGA CGAGAGAGTT GGCGACGCAA GTCGAGGACA CGGCGCGGCG CGTCGGACGG CCGTTTCATT GGGTGGTCAC GAGCTCGATC ATGGGAGGCG AAAATCGGGC GAAAGAGAAA GCGCGATTGC GCAAAGGCGT TTCGCTGTTG ATCGCCACTC CGGGTCGGCT TTTGGACCAC TTGCGCATGA CGGAGTCGTT CAACGTCGAC AACTTGCGAT GGCTCGTCCT CGACGAAGCC GATCGACTAT TAGATTTGGG ATTTGAAGAG GATTTGAACG CGATTCTCAA CGAAATCGGT CGACGCACCG AGGGCGCGAG TCTGTGCACG GCGCTGTTGT CCGCCACGCT CACGCCCGGG ACGGCGCGTT TGGCCGAGCG AATGACGGAT CCGGTGACCA TCGTCGTCGA GCCGGAAAAG GACGATTTGG AAATCGTCGG CGCCGACGGG AGCGATGACG AGGAAGGAGG CACGATGGAC GTCGATGGAT TAAAGCGCAT GGCGAAAATA ATGGCTGGTG GCGAGCGCGT GCGCATGCCC GAAGGGTTGA ATCACACCGT GGTCGAAGTT TCCATGAAGG CGCGACTGCC CGCGTTGGCC GGTTTACTCG CTGGTTGGAT GCAAGGATCA ATTTCCAAAG CGATCGTGTT CTTTTCCTCG TGCGAATCCG TGGAGTATCA CTACAAAACC TTGCGCTGGC TCGCCGCGGG AGGCAAAGGA AAGGTGAAAG ACGACGATGA TTCGATTCAA GGGCCGTACG AAATTTTCCG CCTCCACGGC TTGCTCAGCC AGGGCGACCG CGCGAGCGTG TTTAGGAACT TTGCCAACAC CAAAGCGGGC GTGTTACTGT GCACCGACGT CGGTGCGCGC GGCTTAGACT TCGTCGGCGT CGGAGCAACG GTGCAAGTCG ACGCTCCGAC GGACGCGACG ACGTACATTC ACCGCGTCGG GCGCACCGCC CGCCTCGGAT CTGAGGGCGA AGCCGTGCTC TTTTTACAAC CCAAGGAGCG GGAATTCGCA GAAGTGCTCA CCGAAAAAGG CGTAAACTTC GCCAACGGTT CCGTCGTCGC GATGTTAGAC GTCTTAGAAG ACTCCAAAGA CGCGAGCGAA CGAGACAAAT CGATGTTCAA GAGCATGCCC CATCTCCATC CCGCGTCCCA GCGCATGCTG AAGAAGCTCG TCGCCAAAGT CGCGAGCGAC AAGCAGTACG ACGTCTTGGC CAAGGACGCG TTCCGCGCCC ACGTACGCGC CTACGCCACC TTCCCTTCCG CATTCAAGCA CATCTTTCAC GTCAAGCGTC TCCATCTCGG TCACGTCGCC GCCGCCTTCG GCTTAAAAGA CGCCCCTCAA CTCATCGGCG CGAGCGCCAC GAAAGCCGCG CTCAAGGCGC AAAAAGACGC CGCGAGGAAG AAATCCAACG TCGACGCCAG GCGCAAGAAG
|
Protein sequence | SFEECGLPAS MVKHLMENVG FGAPTAVQAK TIPRLLAGRD VLVRAETGSG KTLSYIAPLY SKIGGITPRV TREEGTRGLV LVPTRELATQ VEDTARRVGR PFHWVVTSSI MGGENRAKEK ARLRKGVSLL IATPGRLLDH LRMTESFNVD NLRWLVLDEA DRLLDLGFEE DLNAILNEIG RRTEGASLCT ALLSATLTPG TARLAERMTD PVTIVVEPEK DDLEIVGADG SDDEEGGTMD VDGLKRMAKI MAGGERVRMP EGLNHTVVEV SMKARLPALA GLLAGWMQGS ISKAIVFFSS CESVEYHYKT LRWLAAGGKG KVKDDDDSIQ GPYEIFRLHG LLSQGDRASV FRNFANTKAG VLLCTDVGAR GLDFVGVGAT VQVDAPTDAT TYIHRVGRTA RLGSEGEAVL FLQPKEREFA EVLTEKGVNF ANGSVVAMLD VLEDSKDASE RDKSMFKSMP HLHPASQRML KKLVAKVASD KQYDVLAKDA FRAHVRAYAT FPSAFKHIFH VKRLHLGHVA AAFGLKDAPQ LIGASATKAA LKAQKDAARK KSNVDARRKK
|
| |