| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_94891 |
|---|
| Symbol | |
|---|
| ID | 5004040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009364 |
|---|
| Strand | - |
|---|
| Start bp | 431490 |
|---|
| End bp | 432818 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640419461 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420173 |
|---|
| Protein GI | 145351632 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.700078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACACG AGAGCGCGGA CGACGCGACG GCGACGGCGA CGGCGGCGGG CGACGATGGG
AAGGCGAAGA AGCCGTGGGG GTTCCTGAGC CCGTTCGGCG CGAGCGCGGC GGTGCTGGAA
CAGGCGGCGG AAGCGAACGA GAAGCAGAGC GGGCGCCGGC GACGGACGGA GGAAGTGAAG
CTGAAGGTCG ATGGACAGTG GTACGATGCG ACGGGGTGGG CGCTGGCGCA TCCCGGTGGG
GCGGGGTTCG TGCGGTTGTT GAACGGACAA GACGCGACGG ATGTGTTTTA CGCGCTGCAC
TCGTACGGGC CGAACGGGAG CGACGAGGCG TTGAAACGCT TGCGCGCGTT GCCGAAGTGC
GATGCACCGT ATGATACGGA AGAGTACGAA ACGCAAAGGC TGACGACGGC GAACGCCGAG
TTCGGGGAGT TGCGAGGGAA GTTGGAGGCG GAGGGCTGGT TTAAACGCAA CGCGCTCTCC
GAACTCTCGG TGTTGGCGCA AGTTTTGGGA TGCTACGTCG TCGGACAAGC CATCGCGGCG
ACGCACCCGA TCTTAGCCGC GATCTCGATC GGGATAGGGA TGCAACAAGC CGGATGGCTC
GCGCACGACT ACGTTCACGG CCGCGGGAAG TGGTGCTCGA TGATGCGCTG CTTTGGCGCG
TTGACGAATG GGTTTTCCGC CGAATGGTGG TCGCACAAGC ACAACATGCA CCACTCGTTC
ACGAACGTCG ACGGTAAGGA CGGCGACATC AAACTCGAGC CTCTGTATTA CTTGTCGCCG
CCGGAGACCA GTGGGCGCCC GGATAGCTGG TTGCGCAAGT ACCAGCACAT CTACGGCTAT
CCGCTCTACG CGATGACGTA CGTGCTCTGG CGCCGACACA GCGTCGCGAG TGCGTGGGCG
CGCAAGGATA AGACTGAGCT CGCTTTGCTC GTCGGCCACT ACGCGTGGTT GTTCGGCACG
CTTCCTTTGG GTGTCGCCAT CGGCTCCATG CTCATCGGTG GGTTTTTGGT AGGCTCTCTC
GTCACCGCTA CGCACCAGAG CGAGGAAATC ATGTATGAAG ACGGTTCCTT CGTCGATATT
CAGTTTAGAA GCACTCGCGA AGCGGACGTG AAGAATCCAC TCGAGCGTTG GTTGTGGGGT
GGTATGGACA CGCAGCTCAT TCACCACTTA TTCCCCACCA TGCCGCGTTA CAAGCTTCAC
AAGCTTCGTC CCATCATGCA GGAATGGGCC CAGAAACACG GATACGATTT TAGAATCTCC
GATTCGCGCG ACATCCTGAA GAAGAACTAC AAACATCTTG AGGGTATCGC CGCATTGGAG
ACGATTTAA
|
|---|
| Protein sequence | MGHESADDAT ATATAAGDDG KAKKPWGFLS PFGASAAVLE QAAEANEKQS GRRRRTEEVK
LKVDGQWYDA TGWALAHPGG AGFVRLLNGQ DATDVFYALH SYGPNGSDEA LKRLRALPKC
DAPYDTEEYE TQRLTTANAE FGELRGKLEA EGWFKRNALS ELSVLAQVLG CYVVGQAIAA
THPILAAISI GIGMQQAGWL AHDYVHGRGK WCSMMRCFGA LTNGFSAEWW SHKHNMHHSF
TNVDGKDGDI KLEPLYYLSP PETSGRPDSW LRKYQHIYGY PLYAMTVASA WARKDKTELA
LLVGHYAWLF GTLPLGVAIG SMLIGGFLVG SLVTATHQSE EIMYEDGSFV DIQFRSTREA
DVKNPLERWL WGGMDTQLIH HLFPTMPRYK LHKLRPIMQE WAQKHGYDFR ISDSRDILKK
NYKHLEGIAA LETI
|
|---|
| |