Gene OSTLU_93383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_93383 
Symbol 
ID5004178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp528664 
End bp529620 
Gene Length957 bp 
Protein Length318 aa 
Translation table 
GC content63% 
IMG OID640419599 
Productpredicted protein 
Protein accessionXP_001420202 
Protein GI145351693 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3325] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.111768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0677184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC GCGCGTTCGT CCTCGCGCTC GCGGCTCTCG CGTCCCGTTC GCACGGCGCG 
GTCGCCGCGA AGACGTTTTC TGTGCACGGG TACCTTCCAG ATTACCGACC CGCGACCGCC
GCCGCGCGAG CGTGCGCGCG CGGTGCGCGC GTGCTGGCGT TCTCCGCCGC GCCGTCGTCG
TCTGGTCGCG CGCTGGACGG CCTGGATGGG GTGTGGAAGA AGACGGACGA GGACGGTGAC
TGCGCGAGCG ATTTGGTGGT CGGCGGCGGC GGCCGAAGCG ACGGATTCGG AGCGGCGGCG
GAGTCTCCCA CCGCCCTCGT GGCGGCGGTG AAGCGCGCGG TGGAGACGCA CGCGTTCGAT
GGAGTGTCGT ACGATTGGGA GTACCCGGCG CGCGAGAGCG ATTGGATGGC GTTCGGGGAG
CTGCTGCGCG CGACGCGCGA CGCGCTCGAC GAGATGGAAG GCGAGCGCAA GCGCTTGAGT
TTCGCGATTC ATCCGACGGT GGCGACGTTC GAGGCGATGG TGAAGTTTGA TTTGATGAAA
TACGTGGACT ACGTGCACAT CATGGCGTAC GACTCGCGCG ATCCGCGCGG ACACGCCGCG
ATGAGTTTCG TGGAGAGTTT GATGGAGTAC GTCAAGCGCG AGTTCGACGA CGTCAGTAAA
TTCACGGTCG GGATACCGTT TTACGCTCGC TCAATGCGAA CGGGCGAAGC GAAAACGTAC
GAGGAGATTC GTCGCGAGTT TGCGAGTTCA GAGAATCTCG ACAAAGATCA AAATGTAGTC
GGAGATTGGG CGTTCGACTC CGTCGGCGTC GTTCGAAAAA AAGTCCGCGT GGCTCGACGA
ATGGGATTCG GCGGGGTGAT GATATGGGAA CTCGGGCAGG ACGTGCAGGA CAGTTCTTCG
TTGTTCCTCG CCATCGTCGA CGAGATCGCG TCGCTCGACG CTCACACCGA ACTGTGA
 
Protein sequence
MRLRAFVLAL AALASRSHGA VAAKTFSVHG YLPDYRPATA AARACARGAR VLAFSAAPSS 
SGRALDGLDG VWKKTDEDGD CASDLVVGGG GRSDGFGAAA ESPTALVAAV KRAVETHAFD
GVSYDWEYPA RESDWMAFGE LLRATRDALD EMEGERKRLS FAIHPTVATF EAMVKFDLMK
YVDYVHIMAY DSRDPRGHAA MSFVESLMEY VKREFDDVSK FTVGIPFYAR SMRTGEAKTY
EEIRREFASS ENLDKDQNVV GDWAFDSVGV VRKKVRVARR MGFGGVMIWE LGQDVQDSSS
LFLAIVDEIA SLDAHTEL