Gene OSTLU_88512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88512 
Symbol 
ID5004190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp578958 
End bp579992 
Gene Length1035 bp 
Protein Length344 aa 
Translation table 
GC content60% 
IMG OID640419611 
ProductPPI family transporter: peroxisomal targeting signal type 2 receptor (PEX7) 
Protein accessionXP_001420041 
Protein GI145351344 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGT CGTCGTACCG CACCGTCGGG TTCAACGGCT ACGCTGTGAA GTTTTCCCCG 
TTCGTGCCGC ACAGAATCGC GATATCGGCG TCGCAAAACT TTGGAATCAT CGGTAACGGC
GCGCAAATCA TCGGCGATGT CGACCCGCTG ACGGGAAATT TCATCGAATT GTGCCGGTTT
CACACGCGCG ATGGGGTGTA CGACTGCGCG TGGAGCGAAG GACACGAAAA TGTCATCATC
AGCGCGTGCG GAGACGGGAG CGTGAAGGTT TGGGACATCG CGAACGGGCC GCAGGCGAAC
CCGCTGCGAA GCCTGCACGA ACACACGCAC GAGGTGTACG CGGCGTCTTG GAATTTGGCG
GGCGGAAGAG ACACGTTCTT GACGGCGTCA TGGGATGATA CGATTAAGTT GTGGAATTTA
GAGCGCGGTG AGAGCATGCG GACGTTCGCG GAACACGCGT ATTGCGTGTA CGCGGCGGAG
TGGAGCCCGC ACCACGCGGA TATTTTCGCG AGCGCGTCGG GGGATTGTTT GCTGAAGATT
TGGGATCTTC GACAGCCGCA CGCGACGCTG AGCGTACCTG TGCACGATTA TGAGACGTTG
TGTTGCGATT GGAACAAGTG GAACGACTGC GTGATCGCCA CGGGGAGCGT GGACAAGACG
GTGCGGTTGT GGGATATTCG GAACCCGTCG CGAGAGTTGC ACACTTTGGT CGGGCACGAT
TACGCCGTGC GTCGGGTGAA GTGCTCGCCG CACGCGGAAA ACGTCGTGTA CACGTGTTCG
TACGACATGA CGGTGGGAAT GTGGGATTGG AAGTCACCCG CGCCGCTGCT GAATCGTTGG
GGGCATCACA CCGAGTTCGC CGTCGGGCTA GACACGTCGT GTTTGGTGGA GGGATTAGTG
GCGTCGTGTG GGTGGGATGA GATGGTACAC GCTTGGAACA CGGTTGATGG AAGCCCGCCA
CCGATTGCGG CGATGATGCG CGCGCCTCAG GCTTATCCTC CCATGGCGAC GGCGTCGCCG
GCTCCCGTGG CGTGA
 
Protein sequence
MPPSSYRTVG FNGYAVKFSP FVPHRIAISA SQNFGIIGNG AQIIGDVDPL TGNFIELCRF 
HTRDGVYDCA WSEGHENVII SACGDGSVKV WDIANGPQAN PLRSLHEHTH EVYAASWNLA
GGRDTFLTAS WDDTIKLWNL ERGESMRTFA EHAYCVYAAE WSPHHADIFA SASGDCLLKI
WDLRQPHATL SVPVHDYETL CCDWNKWNDC VIATGSVDKT VRLWDIRNPS RELHTLVGHD
YAVRRVKCSP HAENVVYTCS YDMTVGMWDW KSPAPLLNRW GHHTEFAVGL DTSCLVEGLV
ASCGWDEMVH AWNTVDGSPP PIAAMMRAPQ AYPPMATASP APVA