Gene OSTLU_88482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88482 
Symbol 
ID5003975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp474572 
End bp475978 
Gene Length1407 bp 
Protein Length468 aa 
Translation table 
GC content67% 
IMG OID640419396 
Productpredicted protein 
Protein accessionXP_001420190 
Protein GI145351668 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.606682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.147074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGGG AGAGACGCGC GCGGGACGAC GACGACGCGC GAGACGCGCG GTCGGGCGGG 
ACGCGCGCGA GCGCGAGCGC GGACGAGGAT GGGACGAATA AATCGTTTGA TTTCGCGGGG
TGCAGTCAAT CGCAGCGGGA CGAACGACGA GGCGCGACGC GAGGGACGGC GCGGTCGCAG
GGGAACGGAG AGAGTCAGGA ATTCGGAGGA CCGGATTTTA TAACGCCCGC GGACGCGCAG
TTCGACGCGT ACGGGGGGTA CGAGGATAAG GAAAACTTTC GAGGCGCGCG GTCGCCGTGC
GCGCTGTCGC CGGCGAGGAA TAAACGGCCG CGGTTCGGGT TGGATTTAGG CGCGTCGCAG
GGGACGCAGG AGTTTGCGAG TCAGCCGCTG GACGCGACGC AGCCGTCGCA GTCGCAAGGG
GAGTTCGGGG GCGGGTTCCG CGTGCCGAGG AATCGGGAAC CGACGCGAGG GGTGGGGTCG
AGGTCGGGGT TGCCGCGCGC GGCGACGTCG CCGCCGTGCG CGAGAAACGC CTTCTTGCCG
GATGATGAGC AGCCTCCGGA GACGAGCGCG CACGCGCGGA GGGCGAATTG TACGAGCGCG
GCGCAGTTGG CCACCATGTC GAGGTTTCGC GCGGATTTCG TCGACCTAGG GTGCATCGCG
CGCGGCGGAT TTTCCAAAGT GCACAAAGTC ATCGGGCGCT TGGACGGGTG TCGGTACGCG
CTCAAGCGCA CGGATAAAAA GCTCCAGACC GAGCGCGAGA GAGCGGAGGC GCTGCGCGAG
GTGCAAGTTT TGGCGAGTTT GACGCAGTGC GCGGAGATCG TGCGCTACCA AAGCGCGTGG
TGGGAGAACG ACCATCTGTA CATTCAAATG GAACTGTGCG ACGGGAGCGC GTCCAAGATG
GTGGATTCGC AGAGCGGCGA ACGCGCGAGC GAGGCTGCGT TGATGCGATG CCTCCTCGAC
GTCTCCGCCG CCTTATCCTA CGCGCACGCC CGAGGTTTGG CGCACATGGA CATCAAGCCC
GATAACATCT TCATTCACAA CCAAGGATAC AAGCTCGGCG ACTGGGGCCG CGTCGCGCTC
CTCAACGGCG ACCGCCGCGA CGCCGCCGTC GACGAGGGCG ACGCTCGATA CCTCTCCTCC
GAGGTTTTGA ACGACGACTT TTCCGCCCTC GACCGCGCCG ACATATTTTC ATTGGGCGCA
TCCATCTACG AGCTCGCCTT GGGCGCCTCC CTCCCCTCGC ACGGCGCCGA GTACCAGTCG
CTTCGCCGCG GCGTCGTCCC GCGCGTCGAC GTCCCCGCGC GCGTCCACGC GTTCGTCCTC
GACGCCATGT CCCCGACGCC TTCCGCGCGT CCCACCGCCG GCCGTCTCCA CGCCCGCGTC
CGCGCCGCGC TCGACGAATT CGCGTGA
 
Protein sequence
MDGERRARDD DDARDARSGG TRASASADED GTNKSFDFAG CSQSQRDERR GATRGTARSQ 
GNGESQEFGG PDFITPADAQ FDAYGGYEDK ENFRGARSPC ALSPARNKRP RFGLDLGASQ
GTQEFASQPL DATQPSQSQG EFGGGFRVPR NREPTRGVGS RSGLPRAATS PPCARNAFLP
DDEQPPETSA HARRANCTSA AQLATMSRFR ADFVDLGCIA RGGFSKVHKV IGRLDGCRYA
LKRTDKKLQT ERERAEALRE VQVLASLTQC AEIVRYQSAW WENDHLYIQM ELCDGSASKM
VDSQSGERAS EAALMRCLLD VSAALSYAHA RGLAHMDIKP DNIFIHNQGY KLGDWGRVAL
LNGDRRDAAV DEGDARYLSS EVLNDDFSAL DRADIFSLGA SIYELALGAS LPSHGAEYQS
LRRGVVPRVD VPARVHAFVL DAMSPTPSAR PTAGRLHARV RAALDEFA