Gene OSTLU_88422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88422 
Symbol 
ID5004078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp252581 
End bp254503 
Gene Length1923 bp 
Protein Length640 aa 
Translation table 
GC content61% 
IMG OID640419499 
ProductABC(ABCG) family transporter: White protein-like protein (ABCG) 
Protein accessionXP_001420124 
Protein GI145351522 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.17821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.28517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGCA CCCTGGCTTG GCGCGACGTC GAATACGTCG TCCGCACGAA AGATGCCGAC 
GGCCACAACG CCTCTTCGCG CGTAATCCTG CGCGGGACGT CCGCGCACGC CAACAGCGGC
CGCGTCTTGG CGATTCTCGG CCCGAGCGGT TGCGGCAAGA CATCGCTGCT CAACGCCCTG
TCCCATCGCC TGGACGTCAA GCGAGGCGAC TCGCTCGAGT GCGTCGTGAC GTACGATGGG
AAACGCATCA CCGGCGCCGA TGACGAGGAC GTTTCGATGA GCTACGTGGA GCAAGAGCCG
AAATTCTTTA GCAATCTCAC GGTGCGAGAG ACGCTCGAGT TGGACGCGCG GCTGCGCGGA
GAGACGCAGG AGAGCGCCGC GGCGCTCGTG AACTCGACGT TGAGAAAGAT GTCGTTGATG
ACGTGCGCGG ATACGGTCGT GGGGGGTGAT ACCGGAGGGA AGGCGGTGGC GGGGATATCA
GGAGGCGAGC GGCGGCGGTT GGCCATCGCG AGCGAGACGC TCGGACTGGG AACGACGGAT
TCGAAGTCGG GTGGTGGTTT AGTCGTGCTC GTGGACGAGC CGACGTCTGG GCTCGATGCA
TTTCAGGCGG ATAAGATGGT GGAGAAGCTG GTCGAGCTCG CGGAACGCGA AGACGCGTGC
GTAGTGTGCA CGCTGCACCA ACCGAGGAGC GCCTCGTTCG CCAAGGTGCA CGACGTGTTG
TTGCTCGCGA GCGGCGCGCG TGTGGCGTAC CACGGGCCGA GCGAAGACGT CATCAGTTAC
TTTCGCGGCA TCGGTTTCGA GTGCCCCGAG CATTTTAATC CGGCCGAGTT TTTGATTGAT
CTCGTGAGCG TCGACGTCGG CGACGGCGTC GGGAGCGACG ACGCCGAGGC CAAGAGCCGC
GCGCGAATAG AACGCATCGT TGACGAGTGG GCAAAGCATA GCAAAACAAC GGCACCGAGA
GCGGCAGATG TGACACGGGC GCCTGAATCG ACTTCGACTT CGAAAGCCGT GCGAAAGAAA
GCCTGTGATC CGCTTAAGCA ATTTAGATTA CTCGCCGGTC GTGCTTGGCG ACAAGCCAAG
CGAGAGATGT GGGTGAACGG CGTCCGCATG GTGGCCTCAG TCGGTCTGGC CGCGATGTTT
GGCGGATGTA ACTTCCAGCT TGGACTCGGA CCTCGTAGTG TGAAACGACG AGTCGCGGTA
CTCATGCAGG CGTGCATTAA CACCTCCATG CTCGCATTGG TGAAGAGCTT GAACGGGTTT
CCACGCGAGC GCGCCACGGT GCGACGCGAG ATGGCGCGCC AAAGCGGTGG CTACAGCCCT
GGCCCGTACT TTCTATCGAA GCTTTTGATA GAAACTCCGA TTGATATGGT GTTTCCAGTC
GTTTTCGGAG GTGTCATGGC GCCCATGGTA GGTTTAAACA AGTCTGGACG AAAGATGTTT
CTGACGTCGC TCGCGTTGCA ATCCGCCGCG GCGTCGTCTT TGGGGCTCTC CATAAGCGCC
CTGAGTCCGA GCGCTGACGT CGCTCTCGCC ATCGGACCGT GCGTAATGGT ACTTAACATC
ATGCTCGGCG ATGCATCCGG CGCATTCGCA GAAATTCCCG ATTCTTTAGC GCCGCTTTCC
AAGCTCTCGC TCATTCGCCA CGCCTTTGAA GGCGTCTTGT GCTCGGAATT TGAGGGCTTG
GTCTTCGAGA AAGAAGACAC CGACGCCAAG AGCAAAAAGC TCGCCAAATC CCGCGGCGTT
CGAAAGGTCC TCGCGCGTCG ATTCAACGAG GGCGTCCCCC CGAGAAACGG CGAGGACGTC
CTCGAAGGCT TGGGTTTGCC CGTTCGCGGG CACGCCGGCA GAGCGTGCAA ATCTCAGCTC
GGCGTCGCCG CGCTCAACGT CGCCGTCACC TACGTCGCTC TGGTGCTCAA ACGCGCGAAA
TAG
 
Protein sequence
MGGTLAWRDV EYVVRTKDAD GHNASSRVIL RGTSAHANSG RVLAILGPSG CGKTSLLNAL 
SHRLDVKRGD SLECVVTYDG KRITGADDED VSMSYVEQEP KFFSNLTVRE TLELDARLRG
ETQESAAALV NSTLRKMSLM TCADTVVGGD TGGKAVAGIS GGERRRLAIA SETLGLGTTD
SKSGGGLVVL VDEPTSGLDA FQADKMVEKL VELAEREDAC VVCTLHQPRS ASFAKVHDVL
LLASGARVAY HGPSEDVISY FRGIGFECPE HFNPAEFLID LVSVDVGDGV GSDDAEAKSR
ARIERIVDEW AKHSKTTAPR AADVTRAPES TSTSKAVRKK ACDPLKQFRL LAGRAWRQAK
REMWVNGVRM VASVGLAAMF GGCNFQLGLG PRSVKRRVAV LMQACINTSM LALVKSLNGF
PRERATVRRE MARQSGGYSP GPYFLSKLLI ETPIDMVFPV VFGGVMAPMV GLNKSGRKMF
LTSLALQSAA ASSLGLSISA LSPSADVALA IGPCVMVLNI MLGDASGAFA EIPDSLAPLS
KLSLIRHAFE GVLCSEFEGL VFEKEDTDAK SKKLAKSRGV RKVLARRFNE GVPPRNGEDV
LEGLGLPVRG HAGRACKSQL GVAALNVAVT YVALVLKRAK