Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_88422 |
Symbol | |
ID | 5004078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009364 |
Strand | - |
Start bp | 252581 |
End bp | 254503 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | |
GC content | 61% |
IMG OID | 640419499 |
Product | ABC(ABCG) family transporter: White protein-like protein (ABCG) |
Protein accession | XP_001420124 |
Protein GI | 145351522 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.17821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.28517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGCA CCCTGGCTTG GCGCGACGTC GAATACGTCG TCCGCACGAA AGATGCCGAC GGCCACAACG CCTCTTCGCG CGTAATCCTG CGCGGGACGT CCGCGCACGC CAACAGCGGC CGCGTCTTGG CGATTCTCGG CCCGAGCGGT TGCGGCAAGA CATCGCTGCT CAACGCCCTG TCCCATCGCC TGGACGTCAA GCGAGGCGAC TCGCTCGAGT GCGTCGTGAC GTACGATGGG AAACGCATCA CCGGCGCCGA TGACGAGGAC GTTTCGATGA GCTACGTGGA GCAAGAGCCG AAATTCTTTA GCAATCTCAC GGTGCGAGAG ACGCTCGAGT TGGACGCGCG GCTGCGCGGA GAGACGCAGG AGAGCGCCGC GGCGCTCGTG AACTCGACGT TGAGAAAGAT GTCGTTGATG ACGTGCGCGG ATACGGTCGT GGGGGGTGAT ACCGGAGGGA AGGCGGTGGC GGGGATATCA GGAGGCGAGC GGCGGCGGTT GGCCATCGCG AGCGAGACGC TCGGACTGGG AACGACGGAT TCGAAGTCGG GTGGTGGTTT AGTCGTGCTC GTGGACGAGC CGACGTCTGG GCTCGATGCA TTTCAGGCGG ATAAGATGGT GGAGAAGCTG GTCGAGCTCG CGGAACGCGA AGACGCGTGC GTAGTGTGCA CGCTGCACCA ACCGAGGAGC GCCTCGTTCG CCAAGGTGCA CGACGTGTTG TTGCTCGCGA GCGGCGCGCG TGTGGCGTAC CACGGGCCGA GCGAAGACGT CATCAGTTAC TTTCGCGGCA TCGGTTTCGA GTGCCCCGAG CATTTTAATC CGGCCGAGTT TTTGATTGAT CTCGTGAGCG TCGACGTCGG CGACGGCGTC GGGAGCGACG ACGCCGAGGC CAAGAGCCGC GCGCGAATAG AACGCATCGT TGACGAGTGG GCAAAGCATA GCAAAACAAC GGCACCGAGA GCGGCAGATG TGACACGGGC GCCTGAATCG ACTTCGACTT CGAAAGCCGT GCGAAAGAAA GCCTGTGATC CGCTTAAGCA ATTTAGATTA CTCGCCGGTC GTGCTTGGCG ACAAGCCAAG CGAGAGATGT GGGTGAACGG CGTCCGCATG GTGGCCTCAG TCGGTCTGGC CGCGATGTTT GGCGGATGTA ACTTCCAGCT TGGACTCGGA CCTCGTAGTG TGAAACGACG AGTCGCGGTA CTCATGCAGG CGTGCATTAA CACCTCCATG CTCGCATTGG TGAAGAGCTT GAACGGGTTT CCACGCGAGC GCGCCACGGT GCGACGCGAG ATGGCGCGCC AAAGCGGTGG CTACAGCCCT GGCCCGTACT TTCTATCGAA GCTTTTGATA GAAACTCCGA TTGATATGGT GTTTCCAGTC GTTTTCGGAG GTGTCATGGC GCCCATGGTA GGTTTAAACA AGTCTGGACG AAAGATGTTT CTGACGTCGC TCGCGTTGCA ATCCGCCGCG GCGTCGTCTT TGGGGCTCTC CATAAGCGCC CTGAGTCCGA GCGCTGACGT CGCTCTCGCC ATCGGACCGT GCGTAATGGT ACTTAACATC ATGCTCGGCG ATGCATCCGG CGCATTCGCA GAAATTCCCG ATTCTTTAGC GCCGCTTTCC AAGCTCTCGC TCATTCGCCA CGCCTTTGAA GGCGTCTTGT GCTCGGAATT TGAGGGCTTG GTCTTCGAGA AAGAAGACAC CGACGCCAAG AGCAAAAAGC TCGCCAAATC CCGCGGCGTT CGAAAGGTCC TCGCGCGTCG ATTCAACGAG GGCGTCCCCC CGAGAAACGG CGAGGACGTC CTCGAAGGCT TGGGTTTGCC CGTTCGCGGG CACGCCGGCA GAGCGTGCAA ATCTCAGCTC GGCGTCGCCG CGCTCAACGT CGCCGTCACC TACGTCGCTC TGGTGCTCAA ACGCGCGAAA TAG
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Protein sequence | MGGTLAWRDV EYVVRTKDAD GHNASSRVIL RGTSAHANSG RVLAILGPSG CGKTSLLNAL SHRLDVKRGD SLECVVTYDG KRITGADDED VSMSYVEQEP KFFSNLTVRE TLELDARLRG ETQESAAALV NSTLRKMSLM TCADTVVGGD TGGKAVAGIS GGERRRLAIA SETLGLGTTD SKSGGGLVVL VDEPTSGLDA FQADKMVEKL VELAEREDAC VVCTLHQPRS ASFAKVHDVL LLASGARVAY HGPSEDVISY FRGIGFECPE HFNPAEFLID LVSVDVGDGV GSDDAEAKSR ARIERIVDEW AKHSKTTAPR AADVTRAPES TSTSKAVRKK ACDPLKQFRL LAGRAWRQAK REMWVNGVRM VASVGLAAMF GGCNFQLGLG PRSVKRRVAV LMQACINTSM LALVKSLNGF PRERATVRRE MARQSGGYSP GPYFLSKLLI ETPIDMVFPV VFGGVMAPMV GLNKSGRKMF LTSLALQSAA ASSLGLSISA LSPSADVALA IGPCVMVLNI MLGDASGAFA EIPDSLAPLS KLSLIRHAFE GVLCSEFEGL VFEKEDTDAK SKKLAKSRGV RKVLARRFNE GVPPRNGEDV LEGLGLPVRG HAGRACKSQL GVAALNVAVT YVALVLKRAK
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