Gene OSTLU_8538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_8538 
Symbol 
ID5003972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp469242 
End bp469730 
Gene Length489 bp 
Protein Length163 aa 
Translation table 
GC content60% 
IMG OID640419393 
Productpredicted protein 
Protein accessionXP_001420187 
Protein GI145351661 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.442806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0204646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCCAAGGTGT ACTTTGACAT GCAGATCGGA CGCGGGGCGC GGGCGACGAA ACTCGGGCGA 
ATCGTGTTCG AGCTGCGGTC GGACGCGACG CCGAAGACGG CGGAAAATTT CAAGGTTTTG
TGCGAAAAGC CCGAGGGCGA GGGATACGTC GGCTCGCGGT TTCATCGCGT GATTCCGTCC
TTCATGTGCC AGGGCGGGGA CTTCACCGCG GATAACGGCA CGGGCGGACG GTCGATTTAC
GGAAGAAATT TCCCGGATGA AAACTTTACG CTCAAGCACG AGGGACCGGG GATTTTGTCG
ATGGCGAACG CTGGACCGAA CACGAATGGG TCGCAATTTT TCATCTGCAC CGTGGCGACG
CCGTTTTTAA ACGGCAAGCA CACGGTGTTT GGCCAAGTGA TCGAGGGAAT GAGCGTGGTG
AAGGCGATCG AATCCGTCGG CTCGCGCGGC GGCGAGACGG CGGCGGACGT CATCATCGGC
GATTGCGGC
 
Protein sequence
PKVYFDMQIG RGARATKLGR IVFELRSDAT PKTAENFKVL CEKPEGEGYV GSRFHRVIPS 
FMCQGGDFTA DNGTGGRSIY GRNFPDENFT LKHEGPGILS MANAGPNTNG SQFFICTVAT
PFLNGKHTVF GQVIEGMSVV KAIESVGSRG GETAADVIIG DCG