| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_8244 |
|---|
| Symbol | |
|---|
| ID | 5003979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009364 |
|---|
| Strand | + |
|---|
| Start bp | 491837 |
|---|
| End bp | 492361 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640419400 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420015 |
|---|
| Protein GI | 145351289 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.222929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.223128 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGTGT TTTTTAGCCG GTTATTCTCG TACTTTGGTG ATCGCGAGGC GCGAATATTG
GTGTTGGGTT TAGACAACGC CGGAAAGACG ACGATTTTGT ACCGGCTGCA AGTGGGAACG
GTGGTGAGCA CGATTCCGAC GATCGGGTTT AACGTCGAAA CCGTGACGCA CAAGAACGTC
AAGTTTCAGG TGTGGGATCT CGGCGGGCAG ACGTCCATAC GGCCGTATTG GCGGTGTTAC
TACCCGAATA CTCAAGCCAT CATTTACGTC GTCGATAGCT CTGACGTCGA GCGCGTGGGG
ACGTCTCGAG AGGAGTTCCA CGCCCTTCTA GAGGAAGAAG AGTTGAAGGA TGCGATCCTT
CTCGTCTTCG CGAATAAGCA GGATCTTCCG GGCGCGCTTT CCGACGCTGA AGTCACGGAA
CAGCTCGGTT TGAGTTCCAT CAAAAACCGC ACGTGGTCCA TCTTCAAGTG CAGCGCACTC
GAGGGCAAGG GCTTATTCGA AGGTCTCGAC TGGCTCGCCG ACGCG
|
|---|
| Protein sequence | MGVFFSRLFS YFGDREARIL VLGLDNAGKT TILYRLQVGT VVSTIPTIGF NVETVTHKNV
KFQVWDLGGQ TSIRPYWRCY YPNTQAIIYV VDSSDVERVG TSREEFHALL EEEELKDAIL
LVFANKQDLP GALSDAEVTE QLGLSSIKNR TWSIFKCSAL EGKGLFEGLD WLADA
|
|---|
| |