Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_718 |
Symbol | |
ID | 5003964 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009364 |
Strand | + |
Start bp | 446110 |
End bp | 448560 |
Gene Length | 2451 bp |
Protein Length | 772 aa |
Translation table | |
GC content | 61% |
IMG OID | 640419385 |
Product | predicted protein |
Protein accession | XP_001420006 |
Protein GI | 145351271 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0625209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.543331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATTCGAGGTG AGATCAAGCG CGTGACGTTT CATTCGAGAG AAAATGGGTA CACCGTGGCG CGCATGGAGG TTGACAGCTC GTGTGAGCTT CCTCCAGGCG CGCTCGCGAC GCCGAAGCGG CGAAGGAAGG GCGCGGCGCC GACGCCGACG GTGACCGTCG TCGGCACGCT TCCGGGAGCG AGCGAAGGAC AAATGCTCGA GCTTATCGGA CAGTGGAAGG AAAACACAAA GTATGGTGTC GAGTTCCTCA TCACCGGTGC GCCCACGGAA CTGAAACCAT CGAGCGAGGA CGGGATGTTG CGATACTTGA GCGGCGGCGC GTTGCCGGGC TGCGGCAAAG TCACCGCTCA GCGCCTCGTC GATCACTTTG GCGTGGACCT GATGGACGTC TTGAACTCGC CCGACGCGGC GAAAAAGTTG TGCGCGTGCG ATGGGATCGG GCCGAAGACG GCGATCAAGT TGAAGACGAA TTGGGACGAG TCGCGCGGCA AGCGAGACGC CGCAGTGTTT TTAGAAAAAC ACGGCGTGCC GTTGGCGCTC GCGCAACGCG CAGCGGCACA ATACGGTCCC ATGACGGAGG ATTTGATTCG CGACAACCCA TTCGAGGCGT TAGGGGCGGT GCGAGGGGCG ACGTTCCATC GCGTCGACGC CTTGGCGTCT CGACTAGGCA AGGCGCCGAA CGATCCGGCG CGTCTCGGCG CCGCCATCAT CGAAGTTTTG AGCGCGGCAG CGGTGAGCAG CGGGCATGCG TACTTGCCGT GGAGCAAAAT CGTCGACGGT GTACGTGCTC TGCTCGGACA ATCGACGATT ACGGACGAGT TGAGCATGCA AGCCGCCGCG GACGCGATGC GAACCAAGGG TGAAATTCGT GTGCAGCGCC TGCCGACAGC AAGCACGGCG GCGGGATCGA TTGAGGTTTT CGAAGGCGAT TGGAGCACTG CGGCGCTTTA CACGAGCGCC ATGCACAGTG CTGAAGTGGC CGTGGCATCC GACGTCATCA ATCGCATTAG AAGACCGAAG ATCAAGGTTG ACTCGGCACG CGTGGAGCGT TGGCTCGAAG CCGCCGCGCA AAAGGAAGGG TGGCGCACGC TGAGCGAAAC GCAAAAAGAC TTTGTTCGAT TAGCGCTTGA ATCGCCAGTT TCTATTCTCA CGGGTGGCCC GGGGACTGGG AAGACGTTTG CCACGCACGT GATCGTCCGT CTGTGGCGCG CCATGGGCAA GAGTGTGGTA ATGTGCGCGC CCACAGGTCG CGCCGCGCAG CGTCTGATGG AAATCACCAC CGCCGGTAGA GACATCGCCA ATCCGGTGAC GAGCTCGACG ATTCATCGAT TGTTGGAGTT CAAGGCTGCG GATGCGCTCG AAGGCATGGA AGATGACGGG CCGATGCAAG CGCTTTCATA CAAGGGTAGA TTCTCGCGAG ACGCGAAGAA TCCCATCCAA GCGGACGTTG TCGTCGTGGA CGAAAGCTCC ATGCTCGACT TGCCGCTGGC TGCCGCGCTC CTCGCCGCCG TGCCTCCCTC AGCGCAAGTC GTATTTGTGG GTGACGCCGA TCAGCTTCCG TCTGTCGGAC CTGGTAGTCT ATTGCGAGAT TTGCTCGCCG CGCGCAACGT TCCGAGCATC GCGTTGACGG ACATCTTCCG CCAAGCGGCG GCGAGCGGCA TCGTTCGCGC CGCGCACGCG ATCAACTCTG GAGCGTTCCT ACCGTTGGAC ATCAGAGAGC AGCGCCACGA TGTGGACATG AATGAGCTTC GCATCGTCGC TGACGCGCAA GACGTCGATT TGCCGCCGAT CGATCCCGAT CTCAAGCCCG ACTGTCTTTG GGTGAGCTTG CCCAGCGAAA CGAACGCGAG CGTAGAGGCG GTGCTTGACC ACATTCTCAG CGACATCTTA CCCGCTCGTG GATTCTCCCC AAAAGATCTT CAAGTCTTAT CTCCAATGCG CCGCGGCGTC GCGAGCACTG GATCGCTCAA CAACTGGCTC CAAACGTCGC TCAATCCGAG CTGTGAGAGC AAGAAGGAGG TCGCCGTCGG TGGATTTTCC GGCGACGTTA CGTTTCGCGA GGGCGACCGC GTGCTGCAAC AGCGCAACGA TTACGACAAA GAAGTATTTA ACGGCGACTT GGGCGTGATT CAAAGAATCG ACACCAAAGC TGGCACCGCC ATCGTGAGCT TCGGCGCTGA TTTCAAGGAA GTTTCGTACA CCAAAGGCGA GCTCAGAGAC TTGATACCGG CGTACGCCAT GACGATTCAC AAAGCCCAAG GCAGCGAGTA TCGCGCCGTC GTTCTCGTGA TGACGAACGC GCATAAGCCA TTACTCCGCC GTGAGCTCCT ATACACGGGC GTGACGCGCG CCAAGGAGCT TCTCGTCATC GTCGCTCCCC GCACGGCGCT CGCCGCCGCC ATCGACACCG CCGGCAAGGA CCGTCGGTGC ACGGGCCTCG TCGACCGACT C
|
Protein sequence | IRGEIKRVTF HSRENGYTVA RMEGAAPTPT VTVVGTLPGA SEGQMLELIG QWKENTKYGV EFLITGAPTE LKPSSEDGML RYLSGGALPG CGKVTAQRLV DHFGVDLMDV LNSPDAAKKL CACDGIGPKT AIKLKTNWDE SRGKRDAAVF LEKHGVPLAL AQRAAAQYGP MTEDLIRDNP FEALGAVRGA TFHRVDALAS RLGKAPNDPA RLGAAIIEVL SAAAVSSGHA YLPWSKIVDG VRALLGQSTI TDELSMQAAA DAMRTKGEIR VQRLPTASTA AGSIEVFEGD WSTAALYTSA MHSAEVAVAS DVINRIRRPK IKVDSARVER WLEAAAQKEG WRTLSETQKD FVRLALESPV SILTGGPGTG KTFATHVIVR LWRAMGKSVV MCAPTGRAAQ RLMEITTAGR DIANPVTSST IHRLLEFKAA DALEGMEDDG PMQALSYKGR FSRDAKNPIQ ADVVVVDESS MLDLPLAAAL LAAVPPSAQV VFVGDADQLP SVGPGSLLRD LLAARNVPSI ALTDIFRQAA ASGIVRAAHA INSGAFLPLD IREQRHDPDC LWVSLPSETN ASVEAVLDHI LSDILPARGF SPKDLQVLSP MRRGVASTGS LNNWLQTSLN PSCESKKEVA VGGFSGDVTF REGDRVLQQR NDYDKEVFNG DLGVIQRIDT KAGTAIVSFG ADFKEVSYTK GELRDLIPAY AMTIHKAQGS EYRAVVLVMT NAHKPLLRRE LLYTGVTRAK ELLVIVAPRT ALAAAIDTAG KDRRCTGLVD RL
|
| |