Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_6692 |
Symbol | |
ID | 5003973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009364 |
Strand | + |
Start bp | 470614 |
End bp | 471369 |
Gene Length | 756 bp |
Protein Length | 252 aa |
Translation table | |
GC content | 62% |
IMG OID | 640419394 |
Product | predicted protein |
Protein accession | XP_001420011 |
Protein GI | 145351281 |
COG category | [S] Function unknown |
COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.283968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00751266 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | CGTTTCGCCG CGTGGGCGGC GACGGGGATC GTCGGCATGC GCGGATGCGC GCGGAGGGAG GTGGCGTCTC GCGCGTTCGA TTTAGGAGGC AAAGTGCGCG TGCTCGATTA CGGCGCGAAT CGCCTCGAAA CGGTTTCGCC TCGGATCAGC GAGTTGAGCA ACGTCGCGCG CATCGTTTTG CGAGATAACG CGTTGAGATC GATGCCGTGG TCCGCCATCG CCTCTTTGAC GCGCTTGACG CATTTGGATT TGAGCGGAAA CGCGGCGTTG GGGAACGACG TCGCGACCGC GACGCCGACG TGCGCGTCGC TCGAGACGCT CTCGCTCGCT CGGTGCGACA TCGCGGGAGA AGTTTGCGAT GATTTCTTCC GGGGACTTCC CAGGCTCAAG CACGTGTCGC TCGTCGCCAA CAGACTCGAG CGTTTACCCG CGTTCGAGAC GAACGGACTG CTCGAAGTCG TCGACGCAAG TCGCAACGCC GTCGTGTCGA TTCCAGCCTC GTACGGCGCG CTCGCGTGTT TGCGCTCGCT GAATCTCGTG GGCAACCGCA TTGAACTCGA AGGCATTCCC GTGGAGCTGT TGAAGCACGC GAAAGCGCTC GTCGAGTTGA ACTTACGCGA GAACCCGATT CTCGTAGAGG CGTTGCGCGA ACGCGACGGG TGGAGCGAAT TCGAGGGGAG AAGGAAACGC CGAGCGGATA AGGCGCTCGA TTCTCGCGTC ATGCTCGGTG ACAACGTCTT CGACGAGGGT GCGGAT
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Protein sequence | RFAAWAATGI VGMRGCARRE VASRAFDLGG KVRVLDYGAN RLETVSPRIS ELSNVARIVL RDNALRSMPW SAIASLTRLT HLDLSGNAAL GNDVATATPT CASLETLSLA RCDIAGEVCD DFFRGLPRLK HVSLVANRLE RLPAFETNGL LEVVDASRNA VVSIPASYGA LACLRSLNLV GNRIELEGIP VELLKHAKAL VELNLRENPI LVEALRERDG WSEFEGRRKR RADKALDSRV MLGDNVFDEG AD
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