| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_625 |
|---|
| Symbol | |
|---|
| ID | 5004232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009364 |
|---|
| Strand | - |
|---|
| Start bp | 38805 |
|---|
| End bp | 40775 |
|---|
| Gene Length | 1971 bp |
|---|
| Protein Length | 657 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 640419653 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420059 |
|---|
| Protein GI | 145351381 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TGGACGGAGC ATCGCGCGCG ATCGACGGCG ACGGCGAGCG CTCAGGGGTT ATACGATCTT
CAAGGTTTGC GCGCGCCCGA AGATTTCGAT CGCTTGGCGC GAGAGACGAT ATCGAAGTGC
GAGGCGATGG CGCGCGCGCT CAAGGCGGCG GCGCCGAGCG CGGCGAGCGT CGGGGCGTTG
GATGAGATAT CTGATGAGGT CTGTCGAGTC GTGGACGTCG CGGAGGTGTG TCGTCACACG
CATCCTTCGC GCGAATACGT CATCGCGGCG GAGAAGGCGT ACGTGCGACT ACAAGATTAC
GTTGCAAGCT TGAACGCCGA CGGCGACTTG TACGAGGCGT TGCGGAGCGC GCGAGAGAGG
GACGCAAAGA ATTTGAGCGA CGAGGGCGCG CGCGTGGCGC TTACTTTGCA AGAAGATTTT
GAACGCGGAG GTATTCATCT CGACCCGGCG AGGCGACGGG ATTTCGACGG GAGCTTGTCG
CGAAGTCTTG AGCTCGGGAT GGAGTTTCAA CGGAATTTGT TGCGCCCAGA GTTAGCGAGC
AGAGTATCGC TCGACAAGAG CACGCTGAGT TCGCTCCCGA AGACAGTGCG AGACCAGTTT
CGAAGTAATG ATGGTAAGCT ATGGACGGGG TTGGTAGATT CATCGAACTC GTCGTTGATG
TTGAGACACC TGAGGGATTC AAACGCGCGC CGAGACGTCT TCATAGCGGC GAACACTGGA
CCCGAGCCAA ACAAAGACGT TTTGGCCAAC CTCATATCTT CTCGTGCTGG TGTCGCGCAT
TCTCTAGGAT TCGAAACATA TGCCAAATAT GCCACCGCAC CGTTGCTTGC TCGATCACCC
GACGCCGTTC GCGAGTTCTT GTTGAGTCTA TCGGATGTCC TTCGGCAGAG CGCAAAGGAC
GAGTACGCCG TCATTGAAAA GTATAATCAC GGCAAACACA TATCGGTGTG GGACAAAACT
TACGCGATGG CACAAGCGCG TGGACACGAG TGCGAATTCA ATTCGGCCGC GATTGCGGAG
TATTTCCCTT TGGAAGGCGT CATCGTCGGC ATCGGCGAGC TTCTTGCGAG AGTTCTCGGT
TTACGCATCG AACTGCAGGA GTTGGCACCT GGCGAAGGAT GGACGAATGA CCTGAAGAAA
CTAGTGGTGA AGACTCGTGA TGGAGACATG CGAGGGACGA TTTATTTGGA CTTGCTCCCG
AGGCCGGGAA AGTTTAATCA CGCCGCACAC TTTGTCATTC GGTGTAGCCG CATGGTGTCG
CCCACAGAAC GGCAGCACCC ATCGGTCGCT CTCGTGTGTA ACTTCCCTCC CGTATCGGGC
AAAGGGCGAT CTTTGTTAAG TCACGGAGAA GTGGAAACGT TTTTACACGA GTTTGGTCAC
GCCATGCACT CTGTGCTTTC GGATACAGAA TTCCAACATT TGTCTGGAAC TCGAGCGCCA
ATGGACATCG TTGAGGTTCC GAGTCATTTA TTCGAGCACT TTGCGTGGGA TCCAAGTGCT
TTGAAGCTTC TTGGAAAACA CTACATGACG CACGAGCCCA TACCTGACGC CATGATTTCC
GCGTTGCGCA AGTCGAGGAA TATATTTCGT TCGATTGAGT CGCAACAACA GGTTGTCTTC
GCGTTGACCG ATCTCGAGCT TCACAACCAA ACATCCGAAC TATCGTCAAA ATCGATCGCT
GATCTCGCTG CAACGATTCA AAACGAGCAC AGTATGTTCA AACCTGTGTC CGGTACGAAT
TGGGAGCTTA GATTTGGTCA CTTTGTCGGC TACGGAGCGA CATATTACTC GTACCTGTAC
GCCGATGTCC TGGCCGATGA CATTTGGAAG CGTTACTTTG AGGGCGACAG CCTCGCGGCG
GGCGCGGCGG AGAGTCTTCG TGACAAATTA TTGCGACACG GGGGATCGAG AGATCCAGAA
AAAGTGATTA GAGATTTGCT AGGAAAGGAT TCGTTGATAG AAGTTAATGG A
|
|---|
| Protein sequence | WTEHRARSTA TASAQGLYDL QGLRAPEDFD RLARETISKC EAMARALKAA APSAASVGAL
DEISDEVCRV VDVAEVCRHT HPSREYVIAA EKAYVRLQDY VASLNADGDL YEALRSARER
DAKNLSDEGA RVALTLQEDF ERGGIHLDPA RRRDFDGSLS RSLELGMEFQ RNLLRPELAS
RVSLDKSTLS SLPKTVRDQF RSNDGKLWTG LVDSSNSSLM LRHLRDSNAR RDVFIAANTG
PEPNKDVLAN LISSRAGVAH SLGFETYAKY ATAPLLARSP DAVREFLLSL SDVLRQSAKD
EYAVIEKYNH GKHISVWDKT YAMAQARGHE CEFNSAAIAE YFPLEGVIVG IGELLARVLG
LRIELQELAP GEGWTNDLKK LVVKTRDGDM RGTIYLDLLP RPGKFNHAAH FVIRCSRMVS
PTERQHPSVA LVCNFPPVSG KGRSLLSHGE VETFLHEFGH AMHSVLSDTE FQHLSGTRAP
MDIVEVPSHL FEHFAWDPSA LKLLGKHYMT HEPIPDAMIS ALRKSRNIFR SIESQQQVVF
ALTDLELHNQ TSELSSKSIA DLAATIQNEH SMFKPVSGTN WELRFGHFVG YGATYYSYLY
ADVLADDIWK RYFEGDSLAA GAAESLRDKL LRHGGSRDPE KVIRDLLGKD SLIEVNG
|
|---|
| |