| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_38345 |
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| Symbol | |
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| ID | 5003978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009364 |
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| Strand | + |
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| Start bp | 488156 |
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| End bp | 489955 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | 640419399 |
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| Product | predicted protein |
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| Protein accession | XP_001420014 |
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| Protein GI | 145351287 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02731] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.526893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.29017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGC GCGCGGGGAC AAAAGCGAAA ACGCGCGCGA CGCGACGGTC TGGAATGCGC
GTCGAGGCGA AGGATTACCC GAAACCGGAT AACATCGATA AGACGGATAA CTATCGCATC
GCCAGTGAGC TGTCGAAGCG ATTCGCGACG GATCTGAAGG CGAATGGGAC GGAGAAGAAG
CGAGTCGCCA TCGTCGGCGG CGGGTTGAGC GGGTTGGCGT GCGCGAAGTA TCTCGCTGAG
GCTGGGCACG AACCGATCGT GTTGGAGGCG AGAGATGTGT TGGGCGGGAA GGTGAGCGCG
TGGCAAGATA AGGATGGGGA TTGGATCGAA ACTGGGTTGC ACATCTTCTT CGGCGCGTAC
CCGAACATGA TGAACTTGTT CAACGAGTTG AAGATTGAGG ATAGGTTACA GTGGAAGGTG
CACAAGATGA TCTTCGCCAT GCAAGAGCTT CCGGGAGAGT TCACGTCGTT CGATTTCATT
AAGGGGATCC CTGCGCCGTT CAACTTTGGT TTGGCGATTC TCATGAATCA AAAAATGTTG
AGTTTGCCTG AAAAGTTGCA GACGGCGCCG CCGCTGTTGC CCATGTTGAT TGAAGGGCAA
GACTTCATCG ACAAGCAAGA CGAACTCAGC GTGCAAGACT TCATGCGCAA GTATGGTATG
CCCGAGCGCA TCAATGAGGA GGTGTTCATT TCCATGGCCA AGGCTTTGGA TTTCATTGAC
CCGGATAAGC TTTCGATGAC CGTCGTGTTG ACGGCGATGA ACCGATTCTT GAACGAAACG
GACGGATTGC AAATGGCATT CTTGGACGGT AACCAGCCCG ATCGACTGTG CGCACCCATG
GTGGACTCTA TCGAGAAGAA TGGTGGCTCC GTCAAGACGA AGCAGCGACT CAAGGAGTTC
GTGCTCAACG AAGACGGTTC GGTGAAGCAC CTGGCCATGG CCAACGGCGA CATCATCGAA
GCTGACGAGT ACATTTCCGC CATGCCCGTG GACGTCATCA AGCGCATGAT GCCCAAGCCA
TGGGCTGAAA TGCCGCACTT TGCGCAGCTC AAGGAGCTCG AGGGTATCCC GGTGATTAAC
ATTCACCTTT GGTTTGATCG CAAGTTGAAA AACGTCGATC ACTTGTGCTT CTCGCGCTCG
CCGTTGCTCT CCGTCTACGC CGACATGAGC ACGACGTGCA AGGAGTACTA CGACGAAGAG
AAGTCCATGC TTGAACTCGT TTTCGCGCCG TGCTCGCCGA TTGCGGGCGG CAAGACGAAC
TGGATCGCGA AGAGCAACCA AGAAATCGTC GACGCCACCA TGTTGGAGCT CGAACGCTTG
TTCCCGCTGG AGATTGGCCC GAAATCCCCC GATGGCGTCG GCGCCAAGCT GCTCAAGCAC
GCTGTCGTGA AGACGCCGCG CTCCGTGTAC GCCGCTATCC CGGGCCGCAA CAAGTTCCGC
CCGTCTCAAG AAACCCCGAT CAAGAACTTC ACCTTGGCGG GCGACTACAC GTCGCAAAAG
TTCTTGGGTT CCATGGAGGG TGCGGTGTTG GGCGGTAAGC TCGCCGCCGA AGTTGTCGCG
TCGCGCGCAA AGGGAATGAA GACGCAAGGC TTGAAGGCGG TTCAAAAGAG TATCATCGAC
TCCATCGGTC CGGCGAAGGA ACCGCTCGGC GTCGTTGGCG AATCTGAATT CGCGTTCGGC
GGCGGCAAGG TCATGGAGGA CGCCGACGAA GCCGAACTCG CGAATTTTGA TGCTGAGCAG
TTGACTAAGC TTGACGGTTG GACGGGCTCT AAGGAGGCGG CGAGCGTCCG CGCGCGCTAA
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| Protein sequence | MTSRAGTKAK TRATRRSGMR VEAKDYPKPD NIDKTDNYRI ASELSKRFAT DLKANGTEKK
RVAIVGGGLS GLACAKYLAE AGHEPIVLEA RDVLGGKVSA WQDKDGDWIE TGLHIFFGAY
PNMMNLFNEL KIEDRLQWKV HKMIFAMQEL PGEFTSFDFI KGIPAPFNFG LAILMNQKML
SLPEKLQTAP PLLPMLIEGQ DFIDKQDELS VQDFMRKYGM PERINEEVFI SMAKALDFID
PDKLSMTVVL TAMNRFLNET DGLQMAFLDG NQPDRLCAPM VDSIEKNGGS VKTKQRLKEF
VLNEDGSVKH LAMANGDIIE ADEYISAMPV DVIKRMMPKP WAEMPHFAQL KELEGIPVIN
IHLWFDRKLK NVDHLCFSRS PLLSVYADMS TTCKEYYDEE KSMLELVFAP CSPIAGGKTN
WIAKSNQEIV DATMLELERL FPLEIGPKSP DGVGAKLLKH AVVKTPRSVY AAIPGRNKFR
PSQETPIKNF TLAGDYTSQK FLGSMEGAVL GGKLAAEVVA SRAKGMKTQG LKAVQKSIID
SIGPAKEPLG VVGESEFAFG GGKVMEDADE AELANFDAEQ LTKLDGWTGS KEAASVRAR
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