Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_38326 |
Symbol | |
ID | 5004089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009364 |
Strand | - |
Start bp | 293278 |
End bp | 294930 |
Gene Length | 1653 bp |
Protein Length | 551 aa |
Translation table | |
GC content | 53% |
IMG OID | 640419510 |
Product | ABC(ABCG) family transporter: multidrug |
Protein accession | XP_001420135 |
Protein GI | 145351548 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.843576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCGC GTGATGGACC ATCGACGATA TTGACGTGGC GTGGGCTGTA TGTAGAGGTG AAGGGCATGA GAAAACGTAT TTTGAATGAC GTTTCAGGCA TGGCTGGAAG GATGGACGAC GTTCGTGGCG GCATGTGCGC GCTCATGGGA CCTTCCGGCG CTGGAAAAAC CACCTTGCTC GATCGACTGT CCGGGCGACT GTCTTCCAAC GTATACGACA GCGCTGGTGA AATATTCATG AATGGTAAAG TCGCGTCAGT GGAAGATATG CGAGCGGTAA GCGGATATGT CATCGACGAG GACGTGTTGC CCGGAACGGC GACTGTATAC GAGCACTTGT TGTTTCACGC CAAACTTCGG CTTCCAGCCG AAACAAGGCA AAGTACAATT CGCAAGCGTG TTCGAGCGAC AATGCAGATT CTCGGCATCG AGAAGCTCGC TGACTCGTTC ATTGGTGACC AGTTCCAGCG CGGCTTGTCC GGTGGAGAAA AGCGCCGTGT GAGCATCGCC ACGGAGCTTT TGATGAGCCC TGGCATTATG TTCCTGGACG AGCCCACGAC TGGGCTGGAC AGTACGAACG CCGCCAAGGT AGTGGATATC CTGTCCGGTC TCGGCGCGAT GGGCACGACG GTATTGCTGA GCATTCACCA GCCACGACCA GACATTTTCC GACTGCTTGA TCGCGTCCTG GTACTGAGTG GCGACGGGAG CGTTGTTTAC TCTGGTCCGT CTGCACTCGC TTCAGCGCAC TTCAACTCCA TGTCGTTCGT CAGCTTGCCT TCCGCGGACT TGCACATCGC GGACTACATG CTGGACGTCG TGCTGAAGAG TCCCCGCTCG GACGTAAAGC GCATGGTGCA AGCGTTTGCC GAGAGCGACA TAGAGGCTAC AAATAAAGTT ACGCACACGG AGCTGTGCGC ACAAAGATTC AGCGTCTCCC CAAGCTTGCT CTCTATTGAC GGCGATGCAA TCGACGACGT CGATAAGAAG CACACAGCGA CGTTTAGAAC GCAAGTCAAG CTTCTTTGTG GACGGTTGCT CCGGCAAATG TACCGGCATC CATTTTTGAT TTACGTGCAC TTCATTTCGT CTTTCGTCGT CGCTTGCGGT GTCGGTGGGA TTTTCTGGCA TAGTGGTACA AATCAAGGAG GTATCCAAAA TAGGATGGGC AGTTTATTCT TCATCTTGCT CTTTTTGACA TTAATGTCAT TGTCTTCGCT GCCGGTTTGG AAGGAGGATC GTTTACTCTT CAAGAGCGAA AGAGCGAGTC GAGTATACAG CGCAGATGCA TATTTCGTGA GCATGCTATT ATTCGATCTG CTACCAATGC GTGTCCTGCC TCCGTTTTTC TTCGGATTCT TCTCGTACGG TATGATCGGT TTGAATGAGG GTGGTCAGTT GAATCTGTTG AAATTTGTCT TCGTGTTGAT CCTGACGAAC ATCGTCGCTA CGTGTTTGTG CATGGCGGTC GGCGCCGCGA ATCGGAACGT ATCTGCGGCG AACATGGTTG CTTCGCTGTG CTTTTTACTC GCGATTCTTT TTGGGGGGTT CTTGCTGAAC AAAGACCACA TTCCGTGGTA TGCACGCTGG ATCGCCGACT TGAGTTTCAT AAGTCACGGC TACGAGGCGC TCGTCGTCAA CGAGTTTGTC GAC
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Protein sequence | MQPRDGPSTI LTWRGLYVEV KGMRKRILND VSGMAGRMDD VRGGMCALMG PSGAGKTTLL DRLSGRLSSN VYDSAGEIFM NGKVASVEDM RAVSGYVIDE DVLPGTATVY EHLLFHAKLR LPAETRQSTI RKRVRATMQI LGIEKLADSF IGDQFQRGLS GGEKRRVSIA TELLMSPGIM FLDEPTTGLD STNAAKVVDI LSGLGAMGTT VLLSIHQPRP DIFRLLDRVL VLSGDGSVVY SGPSALASAH FNSMSFVSLP SADLHIADYM LDVVLKSPRS DVKRMVQAFA ESDIEATNKV THTELCAQRF SVSPSLLSID GDAIDDVDKK HTATFRTQVK LLCGRLLRQM YRHPFLIYVH FISSFVVACG VGGIFWHSGT NQGGIQNRMG SLFFILLFLT LMSLSSLPVW KEDRLLFKSE RASRVYSADA YFVSMLLFDL LPMRVLPPFF FGFFSYGMIG LNEGGQLNLL KFVFVLILTN IVATCLCMAV GAANRNVSAA NMVASLCFLL AILFGGFLLN KDHIPWYARW IADLSFISHG YEALVVNEFV D
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