Gene OSTLU_38326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_38326 
Symbol 
ID5004089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp293278 
End bp294930 
Gene Length1653 bp 
Protein Length551 aa 
Translation table 
GC content53% 
IMG OID640419510 
ProductABC(ABCG) family transporter: multidrug 
Protein accessionXP_001420135 
Protein GI145351548 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.843576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGC GTGATGGACC ATCGACGATA TTGACGTGGC GTGGGCTGTA TGTAGAGGTG 
AAGGGCATGA GAAAACGTAT TTTGAATGAC GTTTCAGGCA TGGCTGGAAG GATGGACGAC
GTTCGTGGCG GCATGTGCGC GCTCATGGGA CCTTCCGGCG CTGGAAAAAC CACCTTGCTC
GATCGACTGT CCGGGCGACT GTCTTCCAAC GTATACGACA GCGCTGGTGA AATATTCATG
AATGGTAAAG TCGCGTCAGT GGAAGATATG CGAGCGGTAA GCGGATATGT CATCGACGAG
GACGTGTTGC CCGGAACGGC GACTGTATAC GAGCACTTGT TGTTTCACGC CAAACTTCGG
CTTCCAGCCG AAACAAGGCA AAGTACAATT CGCAAGCGTG TTCGAGCGAC AATGCAGATT
CTCGGCATCG AGAAGCTCGC TGACTCGTTC ATTGGTGACC AGTTCCAGCG CGGCTTGTCC
GGTGGAGAAA AGCGCCGTGT GAGCATCGCC ACGGAGCTTT TGATGAGCCC TGGCATTATG
TTCCTGGACG AGCCCACGAC TGGGCTGGAC AGTACGAACG CCGCCAAGGT AGTGGATATC
CTGTCCGGTC TCGGCGCGAT GGGCACGACG GTATTGCTGA GCATTCACCA GCCACGACCA
GACATTTTCC GACTGCTTGA TCGCGTCCTG GTACTGAGTG GCGACGGGAG CGTTGTTTAC
TCTGGTCCGT CTGCACTCGC TTCAGCGCAC TTCAACTCCA TGTCGTTCGT CAGCTTGCCT
TCCGCGGACT TGCACATCGC GGACTACATG CTGGACGTCG TGCTGAAGAG TCCCCGCTCG
GACGTAAAGC GCATGGTGCA AGCGTTTGCC GAGAGCGACA TAGAGGCTAC AAATAAAGTT
ACGCACACGG AGCTGTGCGC ACAAAGATTC AGCGTCTCCC CAAGCTTGCT CTCTATTGAC
GGCGATGCAA TCGACGACGT CGATAAGAAG CACACAGCGA CGTTTAGAAC GCAAGTCAAG
CTTCTTTGTG GACGGTTGCT CCGGCAAATG TACCGGCATC CATTTTTGAT TTACGTGCAC
TTCATTTCGT CTTTCGTCGT CGCTTGCGGT GTCGGTGGGA TTTTCTGGCA TAGTGGTACA
AATCAAGGAG GTATCCAAAA TAGGATGGGC AGTTTATTCT TCATCTTGCT CTTTTTGACA
TTAATGTCAT TGTCTTCGCT GCCGGTTTGG AAGGAGGATC GTTTACTCTT CAAGAGCGAA
AGAGCGAGTC GAGTATACAG CGCAGATGCA TATTTCGTGA GCATGCTATT ATTCGATCTG
CTACCAATGC GTGTCCTGCC TCCGTTTTTC TTCGGATTCT TCTCGTACGG TATGATCGGT
TTGAATGAGG GTGGTCAGTT GAATCTGTTG AAATTTGTCT TCGTGTTGAT CCTGACGAAC
ATCGTCGCTA CGTGTTTGTG CATGGCGGTC GGCGCCGCGA ATCGGAACGT ATCTGCGGCG
AACATGGTTG CTTCGCTGTG CTTTTTACTC GCGATTCTTT TTGGGGGGTT CTTGCTGAAC
AAAGACCACA TTCCGTGGTA TGCACGCTGG ATCGCCGACT TGAGTTTCAT AAGTCACGGC
TACGAGGCGC TCGTCGTCAA CGAGTTTGTC GAC
 
Protein sequence
MQPRDGPSTI LTWRGLYVEV KGMRKRILND VSGMAGRMDD VRGGMCALMG PSGAGKTTLL 
DRLSGRLSSN VYDSAGEIFM NGKVASVEDM RAVSGYVIDE DVLPGTATVY EHLLFHAKLR
LPAETRQSTI RKRVRATMQI LGIEKLADSF IGDQFQRGLS GGEKRRVSIA TELLMSPGIM
FLDEPTTGLD STNAAKVVDI LSGLGAMGTT VLLSIHQPRP DIFRLLDRVL VLSGDGSVVY
SGPSALASAH FNSMSFVSLP SADLHIADYM LDVVLKSPRS DVKRMVQAFA ESDIEATNKV
THTELCAQRF SVSPSLLSID GDAIDDVDKK HTATFRTQVK LLCGRLLRQM YRHPFLIYVH
FISSFVVACG VGGIFWHSGT NQGGIQNRMG SLFFILLFLT LMSLSSLPVW KEDRLLFKSE
RASRVYSADA YFVSMLLFDL LPMRVLPPFF FGFFSYGMIG LNEGGQLNLL KFVFVLILTN
IVATCLCMAV GAANRNVSAA NMVASLCFLL AILFGGFLLN KDHIPWYARW IADLSFISHG
YEALVVNEFV D